RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 EIF4EP06730 217 aaKnown RBP9.69□□□□□ -0.86
CPSF1-204ENST00000529288 RPL35AP18077 110 aaKnown RBP9.69□□□□□ -0.86
CPSF1-204ENST00000529288 S100GP29377 79 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 SNX29P2Q8IUI4 249 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 MISP3Q96FF7 219 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 TMEM56Q96MV1 263 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 SPAG8Q99932 426 aaPredicted RBP9.69□□□□□ -0.86
CPSF1-204ENST00000529288 C5orf66Q9H5L9 145 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
CPSF1-204ENST00000529288 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
CPSF1-204ENST00000529288 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
CPSF1-204ENST00000529288 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 SMIM31A0A1B0GVY4 71 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 NDUFA4O00483 81 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 TFPI2P48307 235 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 APOC4P55056 127 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 RNASE12Q5GAN4 147 aaKnown RBP9.68□□□□□ -0.86
CPSF1-204ENST00000529288 SPSB3Q6PJ21 355 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 LYSMD2Q8IV50 215 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 OR5B3Q8NH48 314 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 OR4A16Q8NH70 328 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 FKBP11Q9NYL4 201 aa9.68□□□□□ -0.86
CPSF1-204ENST00000529288 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
CPSF1-204ENST00000529288 DBX1A6NMT0 343 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 K7EIM0 57 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 TSPAN4O14817 238 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 SPRY2O43597 315 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 IGHV3-48P01763 117 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 CTSDP07339 412 aaPredicted RBP9.67□□□□□ -0.86
CPSF1-204ENST00000529288 NAT1P18440 290 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 SPCS2Q15005 226 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 LPCAT3Q6P1A2 487 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 GPR141Q7Z602 305 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 TBC1D26Q86UD7 250 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 STPG3Q8N7X2 389 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
CPSF1-204ENST00000529288 CMTM3Q96MX0 182 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 TSC22D3Q99576 134 aa9.67□□□□□ -0.86
CPSF1-204ENST00000529288 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 NUPL2O15504 423 aaKnown RBP9.66□□□□□ -0.86
CPSF1-204ENST00000529288 LY6G6CO95867 125 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 APOA1P02647 267 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 FGF2P09038 288 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 ELK1P19419 428 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 ADMP35318 185 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 RORCP51449 518 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
CPSF1-204ENST00000529288 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 C15orf61A6NNL5 157 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 FAM25AB3EWG3 89 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 FAM25CB3EWG5 89 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 FAM25GB3EWG6 89 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 F8W735 103 aaPredicted RBP9.65□□□□□ -0.86
CPSF1-204ENST00000529288 K7EMT4 169 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 M0QYG6 137 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 HPGDSO60760 199 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 PGAM2P15259 253 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 MFAP4P55083 255 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 RELQ04864 619 aaPredicted RBP9.65□□□□□ -0.86
CPSF1-204ENST00000529288 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 LYG2Q86SG7 212 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 GBGT1Q8N5D6 347 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 OR1P1Q8NH06 330 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 GPX8Q8TED1 209 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 MRGPRFQ96AM1 343 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 RNF2Q99496 336 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 RHPN1-AS1Q9BWJ2 59 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 SMPXQ9UHP9 88 aa9.65□□□□□ -0.86
CPSF1-204ENST00000529288 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 C15orf62A8K5M9 175 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 MT-CO2P00403 227 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 CTSGP08311 255 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 ZNF182P17025 639 aaPredicted RBP9.64□□□□□ -0.87
CPSF1-204ENST00000529288 BMI1P35226 326 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 RCVRNP35243 200 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 RPL5P46777 297 aaKnown RBP9.64□□□□□ -0.87
CPSF1-204ENST00000529288 ERHP84090 104 aaKnown RBP9.64□□□□□ -0.87
CPSF1-204ENST00000529288 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPSF1-204ENST00000529288 ZNF124Q15973 351 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 IZUMO4Q1ZYL8 232 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 Q6ZWC4 215 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 CLVS1Q8IUQ0 354 aaPredicted RBP9.64□□□□□ -0.87
CPSF1-204ENST00000529288 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
CPSF1-204ENST00000529288 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 TMEM14BQ9NUH8 114 aa9.64□□□□□ -0.87
CPSF1-204ENST00000529288 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
CPSF1-204ENST00000529288 UBE2CO00762 179 aa9.63□□□□□ -0.87
CPSF1-204ENST00000529288 CHEK1O14757 476 aa9.63□□□□□ -0.87
CPSF1-204ENST00000529288 GNG7O60262 68 aa9.63□□□□□ -0.87
CPSF1-204ENST00000529288 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms