RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DIAPH2-AS1Q14236 149 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 HES1Q14469 280 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 RSU1Q15404 277 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 ZNF57Q68EA5 555 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-212ENST00000529046 UFSP1Q6NVU6 142 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 FAM71F2Q6NXP2 309 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 LHFPL3Q86UP9 236 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 LYPD6Q86Y78 171 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 CENPSQ8N2Z9 138 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 TCTEX1D1Q8N7M0 179 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 SUMF2Q8NBJ7 301 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 ZNF439Q8NDP4 499 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 NPBQ8NG41 125 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 OR51A2Q8NGJ7 313 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 OR5D18Q8NGL1 313 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 KCNG3Q8TAE7 436 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 PLPPR1Q8TBJ4 325 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 TNFAIP8L1Q8WVP5 186 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 TSEN15Q8WW01 171 aaKnown RBP3.3□□□□□ -1.88
CSDE1-212ENST00000529046 RTN4IP1Q8WWV3 396 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-212ENST00000529046 TMEM106AQ96A25 262 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 SMIM19Q96E16 107 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 NOL4LQ96MY1 436 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-212ENST00000529046 SPACA5Q96QH8 159 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 RNF5Q99942 180 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 RASL11BQ9BPW5 248 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 AUNIPQ9H7T9 357 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 ISG20L2Q9H9L3 353 aaKnown RBP3.3□□□□□ -1.88
CSDE1-212ENST00000529046 FGF20Q9NP95 211 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-212ENST00000529046 BABAM2Q9NXR7 383 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 SLC2A8Q9NY64 477 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 RPH3ALQ9UNE2 315 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 U3KQK5 164 aa3.3□□□□□ -1.88
CSDE1-212ENST00000529046 LOC100130705A0A1B0GUX0 176 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 NCBP2LA6PVI3 153 aaKnown RBP3.29□□□□□ -1.88
CSDE1-212ENST00000529046 MCRIP1C9JLW8 97 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 H3BSH0 61 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 AIPO00170 330 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 SDCBPO00560 298 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-212ENST00000529046 ITGB1BP1O14713 200 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 YPEL1O60688 119 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 OR7C1O76099 320 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-212ENST00000529046 NDUFA3O95167 84 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 BRI3O95415 125 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 HLA-DRB1P01911 266 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 OR8U8P0C7N1 319 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 CD37P11049 281 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 VDAC1P21796 283 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 TAS2R43P59537 309 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 PPP3R1P63098 170 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 ZNF616Q08AN1 781 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 PRR4Q16378 134 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 PIGYQ3MUY2 71 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 Q499Y3 187 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 MORN2Q502X0 79 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 YIF1BQ5BJH7 314 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 CT45A1Q5HYN5 189 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 C9orf129Q5T035 196 aaKnown RBP3.29□□□□□ -1.88
CSDE1-212ENST00000529046 C6orf183Q5T699 404 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 TMPRSS11AQ6ZMR5 421 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 MOB3BQ86TA1 216 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 ZNF429Q86V71 674 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 SLC38A6Q8IZM9 456 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 STX19Q8N4C7 294 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 OR52I1Q8NGK6 324 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 CT45A3Q8NHU0 189 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 RGP1Q92546 391 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-212ENST00000529046 ARL11Q969Q4 196 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 YPEL2Q96QA6 119 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 GPER1Q99527 375 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 S100A13Q99584 98 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 KIR2DL4Q99706 377 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 PDCD1LG2Q9BQ51 273 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 UQCC2Q9BRT2 126 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 C9orf16Q9BUW7 83 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 OR51J1Q9H342 316 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 C8orf4Q9NR00 106 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 CKLFQ9UBR5 152 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 JPT1Q9UK76 154 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 ERGIC3Q9Y282 383 aa3.29□□□□□ -1.88
CSDE1-212ENST00000529046 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-212ENST00000529046 C12orf77C9JDV5 145 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 GEMIN2O14893 280 aaKnown RBP3.28□□□□□ -1.88
CSDE1-212ENST00000529046 CDRT1O95170 752 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 HBZP02008 142 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 FUT3P21217 361 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 GNG10P50151 68 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 RAB9AP51151 201 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 RPS11P62280 158 aaKnown RBP eCLIP3.28□□□□□ -1.88
CSDE1-212ENST00000529046 MED21Q13503 144 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 ZSCAN26Q16670 478 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 SYT6Q5T7P8 510 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-212ENST00000529046 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 ZNF660Q6AZW8 331 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-212ENST00000529046 RNASEKQ6P5S7 137 aaKnown RBP3.28□□□□□ -1.88
CSDE1-212ENST00000529046 CD200R1LQ6Q8B3 271 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 CBR4Q8N4T8 237 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 OR11H1Q8NG94 326 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 SUN5Q8TC36 379 aa3.28□□□□□ -1.88
CSDE1-212ENST00000529046 APH1BQ8WW43 257 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms