RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 IGHV3-48P01763 117 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 CTXN2P0C2S0 81 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 CNIH2Q6PI25 160 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 TRPT1Q86TN4 253 aaKnown RBP13.62□□□□□ -0.23
SSRP1-204ENST00000529002 CENPSQ8N2Z9 138 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 OR10C1Q96KK4 312 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 CENPOQ9BU64 300 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 ATG5Q9H1Y0 275 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 CDK2AP2O75956 126 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 TAS2R31P59538 309 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 SSX1Q16384 188 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 POU2AF1Q16633 256 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 UBE2DNLQ8IWF7 75 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 DMBX1Q8NFW5 382 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 DGCR14Q96DF8 476 aaKnown RBP13.61□□□□□ -0.23
SSRP1-204ENST00000529002 NSG2Q9Y328 171 aa13.61□□□□□ -0.23
SSRP1-204ENST00000529002 TMEM235A6NFC5 223 aa13.6□□□□□ -0.23
SSRP1-204ENST00000529002 CYB5BO43169 146 aa13.6□□□□□ -0.23
SSRP1-204ENST00000529002 ST8SIA3O43173 380 aa13.6□□□□□ -0.23
SSRP1-204ENST00000529002 NQO2P16083 231 aa13.6□□□□□ -0.23
SSRP1-204ENST00000529002 RAB6AP20340 208 aa13.6□□□□□ -0.23
SSRP1-204ENST00000529002 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
SSRP1-204ENST00000529002 SSX5O60225 188 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 HPRT1P00492 218 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 CD74P04233 296 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 RPL11P62913 178 aaKnown RBP13.59□□□□□ -0.23
SSRP1-204ENST00000529002 RELQ04864 619 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-204ENST00000529002 TNP2Q05952 138 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 C1orf134Q5TEV5 83 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 HACD4Q5VWC8 232 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 OR1L8Q8NGR8 309 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 OR51H1Q8NH63 302 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 ATP6V0BQ99437 205 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 NDUFA4L2Q9NRX3 87 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 RABAC1Q9UI14 185 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 ANXA10Q9UJ72 324 aa13.59□□□□□ -0.23
SSRP1-204ENST00000529002 APOBP04114 4563 aaKnown RBP13.58□□□□□ -0.24
SSRP1-204ENST00000529002 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 METTL21EPA6NDL7 271 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 IFITM5A6NNB3 132 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.241e-6■□□□□ 9.6
SSRP1-204ENST00000529002 C10orf67Q8IYJ2 551 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 Q8N1X5 172 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 OR13F1Q8NGS4 319 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 SLC25A46Q96AG3 418 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 AIFM2Q9BRQ8 373 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 DCSTAMPQ9H295 470 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 VSIRQ9H7M9 311 aa13.58□□□□□ -0.24
SSRP1-204ENST00000529002 IFNA21P01568 189 aa13.57□□□□□ -0.24
SSRP1-204ENST00000529002 IFNA17P01571 189 aa13.57□□□□□ -0.24
SSRP1-204ENST00000529002 FCGR2CP31995 323 aa13.57□□□□□ -0.24
SSRP1-204ENST00000529002 UBE2UQ5VVX9 321 aa13.57□□□□□ -0.24
SSRP1-204ENST00000529002 LSM10Q969L4 123 aaKnown RBP13.57□□□□□ -0.24
SSRP1-204ENST00000529002 MISP3Q96FF7 219 aa13.57□□□□□ -0.24
SSRP1-204ENST00000529002 NXF2Q9GZY0 626 aaKnown RBP13.57□□□□□ -0.24
SSRP1-204ENST00000529002 I3L2K1 104 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 FCER2P06734 321 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 FXYD4P59646 89 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 SOHLH1Q5JUK2 328 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
SSRP1-204ENST00000529002 MORN3Q6PF18 240 aaPredicted RBP13.56□□□□□ -0.24
SSRP1-204ENST00000529002 TOMM20LQ6UXN7 152 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 SLC5A7Q9GZV3 580 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 SCRT2Q9NQ03 307 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 TMEM14BQ9NUH8 114 aa13.56□□□□□ -0.24
SSRP1-204ENST00000529002 DBX1A6NMT0 343 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 EIF4EP06730 217 aaKnown RBP13.55□□□□□ -0.24
SSRP1-204ENST00000529002 ZNF688P0C7X2 276 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 SPP1P10451 314 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 MFAP4P55083 255 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 TRAM1Q15629 374 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 ZNF818PQ6ZRF7 136 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
SSRP1-204ENST00000529002 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
SSRP1-204ENST00000529002 PPYP01298 95 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 GNG2P59768 71 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 CATR1Q13166 79 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 AADACL3Q5VUY0 350 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 DUSP18Q8NEJ0 188 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 PLEKHA2Q9HB19 425 aa13.54□□□□□ -0.24
SSRP1-204ENST00000529002 K7EQG2 157 aa13.53□□□□□ -0.24
SSRP1-204ENST00000529002 MT-CO2P00403 227 aa13.53□□□□□ -0.24
SSRP1-204ENST00000529002 RANBP1P43487 201 aa13.53□□□□□ -0.24
SSRP1-204ENST00000529002 TMEM41BQ5BJD5 291 aa13.53□□□□□ -0.24
SSRP1-204ENST00000529002 PACRGLQ8N7B6 248 aa13.53□□□□□ -0.24
SSRP1-204ENST00000529002 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
SSRP1-204ENST00000529002 TRAV2A0A0B4J234 112 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 MARCH11A6NNE9 402 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 PDCD5O14737 125 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 GNG7O60262 68 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 PSMA1P25786 263 aaKnown RBP13.52□□□□□ -0.25
SSRP1-204ENST00000529002 NPY1RP25929 384 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 G6PCP35575 357 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 EMP1P54849 157 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 MLLT11Q13015 90 aaPredicted RBP13.52□□□□□ -0.25
SSRP1-204ENST00000529002 MSMO1Q15800 293 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms