RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PRR20DP86480 221 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 PRR20BP86481 221 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 PRR20AP86496 221 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 PSG5Q15238 335 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 PRSS8Q16651 343 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 MIC13Q5XKP0 118 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 FAM90A2PQ658T7 463 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 ZNF114Q8NC26 417 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 FAM122AQ96E09 287 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 RNF2Q99496 336 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 HIVEP3Q5T1R4 2406 aa11.91□□□□□ -0.5
ECHDC1-220ENST00000528402 ATRXP46100 2492 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 CORTO00230 105 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 PDE6DO43924 150 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 COX7A1P24310 79 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 CEBPGP53567 150 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 PAX2Q02962 417 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 AKIRIN2Q53H80 203 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 PVRIGQ6DKI7 326 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 STPG3Q8N7X2 389 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 C1orf159Q96HA4 380 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 TMEM242Q9NWH2 141 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 SIGLEC9Q9Y336 463 aa11.9□□□□□ -0.5
ECHDC1-220ENST00000528402 F6UZH7 168 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 CLN5O75503 358 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 LY6HO94772 140 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 FBP1P09467 338 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 CD81P60033 236 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 ARF6P62330 175 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 GAMTQ14353 236 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 MINOS1Q5TGZ0 78 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 SLC16A13Q7RTY0 426 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 PPP1R27Q86WC6 154 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 OR10W1Q8NGF6 305 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 SDF2L1Q9HCN8 221 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 MINOS1-NBL1R4GNA1 71 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
ECHDC1-220ENST00000528402 A0A1W2PPR1 153 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 CGB1A6NKQ9 187 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 ZNF727A8MUV8 499 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 ODF3BA8MYP8 253 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 OVOL3O00110 214 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 SELENOTP62341 195 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 WT1-ASQ06250 92 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 HABP2Q14520 560 aaPredicted RBP11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 C20orf24Q9BUV8 137 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 CTDSP1Q9GZU7 261 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 TMPRSS5Q9H3S3 457 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 MLXQ9UH92 298 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 NBASA2RRP1 2371 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 CACNA1AO00555 2505 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 NCOR2Q9Y618 2525 aa11.88□□□□□ -0.51
ECHDC1-220ENST00000528402 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 PAGE4O60829 102 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 OR2C1O95371 312 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 IGHV2-5P01817 119 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 LINC00869P0C866 280 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 CDKN1AP38936 164 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 TAS2R45P59539 299 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 SSX2Q16385 188 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 TMEM241Q24JQ0 296 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 MRGPRG-AS1Q2M3A8 158 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 SSMEM1Q8WWF3 244 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 OR4F4Q96R69 305 aa11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 METTL1Q9UBP6 276 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-220ENST00000528402 IGHV3-72A0A0B4J1Y9 119 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 HMGB3O15347 200 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 TNXAQ16473 311 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 SPNS3Q6ZMD2 512 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 CYP2G1PQ6ZSU1 146 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 NPBQ8NG41 125 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 C22orf15Q8WYQ4 148 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 MRPL32Q9BYC8 188 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 FUT9Q9Y231 359 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 TPRP12270 2363 aaKnown RBP11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 E7EUB6 86 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 VENTXO95231 258 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 MOSP00540 346 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 OR10J1P30954 320 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 PDLIM4P50479 330 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 PQLC2Q6ZP29 291 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
ECHDC1-220ENST00000528402 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms