RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 OMGP23515 440 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 CD34P28906 385 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 IL2RGP31785 369 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 PPP1CCP36873 323 aaKnown RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 CEACAM6P40199 344 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 PIGPP57054 158 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 TAS2R31P59538 309 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 DHODHQ02127 395 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 SRSF7Q16629 238 aaKnown RBP eCLIP3.39□□□□□ -1.87
CD44-226ENST00000527889 ZFP69Q49AA0 526 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 TMEM128Q5BJH2 165 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 UTF1Q5T230 341 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 DHRS11Q6UWP2 260 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 FAM159AQ6UWV7 190 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 BTNL3Q6UXE8 466 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 ZNF818PQ6ZRF7 136 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 IL17RELQ6ZVW7 336 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 TCF23Q7RTU1 214 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 STHQ8IWL8 128 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 H1FOOQ8IZA3 346 aaPredicted RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 HSD17B11Q8NBQ5 300 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 INO80EQ8NBZ0 244 aaPredicted RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 ZFAND1Q8TCF1 268 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 H1FXQ92522 213 aaKnown RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 LEAP2Q969E1 77 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 ARL11Q969Q4 196 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 SCGB3A2Q96PL1 93 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 RNF2Q99496 336 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 ZNF436Q9C0F3 470 aaPredicted RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 CSTL1Q9H114 145 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 NARFLQ9H6Q4 476 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 DNAJC4Q9NNZ3 241 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 GSN-AS1Q9NRJ2 163 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 CCL28Q9NRJ3 127 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 CALYQ9NYX4 217 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 KCNS2Q9ULS6 477 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 KCNIP3Q9Y2W7 256 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 OR2W1Q9Y3N9 320 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 MMP24Q9Y5R2 645 aa3.39□□□□□ -1.87
CD44-226ENST00000527889 EPPK1P58107 5090 aaKnown RBP3.39□□□□□ -1.87
CD44-226ENST00000527889 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 LOC105371242A0A075B767 164 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 TRGV10A0A0A0MS01 117 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 A0A1W2PPE3 182 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 CRYM-AS1A6NIL9 109 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 G3V3Q6 166 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 H0Y980 276 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 GPR31O00270 319 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 DVL1O14640 695 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 TNFRSF13BO14836 293 aaPredicted RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 PPIHO43447 177 aaKnown RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 TNFSF12O43508 249 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 RP2O75695 350 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 MMP23AO75900 390 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SLC22A5O76082 557 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 BRI3O95415 125 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 CLDN1O95832 211 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 IGHV2-70P01814 119 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SERPINE2P07093 398 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 OR5AC1P0C628 307 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 OR8U9P0C7N5 309 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 CCL3L1P16619 93 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 NFYBP25208 207 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 ERP29P30040 261 aaKnown RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 GNRHRP30968 328 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 GPX4P36969 197 aaPredicted RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 RPL35P42766 123 aaKnown RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 H2BFSP57053 126 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 CD81P60033 236 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 RBX1P62877 108 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 DLK1P80370 383 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 PNRC1Q12796 327 aaPredicted RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 TMEM187Q14656 261 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SURF2Q15527 256 aaPredicted RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 KCNJ8Q15842 424 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 C17orf58Q2M2W7 97 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SP6Q3SY56 376 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 Q5BKY6 102 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 RBMS3Q6XE24 437 aaKnown RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 ZNF66Q6ZN08 573 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SSX7Q7RTT5 188 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SGPP2Q8IWX5 399 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 TCTE3Q8IZS6 198 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SPICQ8N5J4 248 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 OR11H4Q8NGC9 324 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 OR10W1Q8NGF6 305 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 OR2T35Q8NGX2 323 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 OR8U1Q8NH10 309 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 RTN4IP1Q8WWV3 396 aaPredicted RBP3.38□□□□□ -1.87
CD44-226ENST00000527889 GALMQ96C23 342 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 SFRP2Q96HF1 295 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 ABHD14BQ96IU4 210 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 MAP1LC3CQ9BXW4 147 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 NAA60Q9H7X0 242 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 RAB9BQ9NP90 201 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 BIN3Q9NQY0 253 aa3.38□□□□□ -1.87
CD44-226ENST00000527889 GNG12Q9UBI6 72 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms