RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CMTM2Q8TAZ6 248 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 ZNF503Q96F45 646 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 NABP2Q9BQ15 211 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 LRFN3Q9BTN0 628 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
LINC01001-201ENST00000526704 PLEKHA3Q9HB20 300 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 ZNRD1Q9P1U0 126 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 NAGKQ9UJ70 344 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 V9GYV3 84 aa9.53□□□□□ -0.88
LINC01001-201ENST00000526704 SPAARA0A1B0GVQ0 90 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.89
LINC01001-201ENST00000526704 J3QR06 171 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 UPK2O00526 184 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 DLEU1O43261 78 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 IGKV1-16P04430 117 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 FRMD6-AS1P0C7T7 363 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 CT45A6P0DMU7 189 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 CT45A5P0DMU8 189 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 CT45A7P0DMV0 189 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 OR5I1Q13606 314 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 DEFB108BQ8NET1 73 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 CORO2AQ92828 525 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 MS4A10Q96PG2 267 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 KIR2DL5BA0A0G2JN68 375 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 KIR2DL5BA0A0G2JPC4 375 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 IGHV1-46P01743 117 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 ERVFC1-1P60608 527 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 GAGE1Q13065 139 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 PSG5Q15238 335 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 RPEL1Q2QD12 228 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 C3orf36Q3SXR2 165 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 KRTCAP3Q53RY4 240 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 CENPWQ5EE01 88 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 SLC25A48Q6ZT89 311 aaKnown RBP9.52□□□□□ -0.89
LINC01001-201ENST00000526704 KIR2DL5AQ8N109 375 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 OR1L6Q8NGR2 347 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 SNRNP40Q96DI7 357 aaKnown RBP9.52□□□□□ -0.89
LINC01001-201ENST00000526704 CCL13Q99616 98 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 LINC00574Q9H8X3 128 aa9.52□□□□□ -0.89
LINC01001-201ENST00000526704 SMG1Q96Q15 3661 aaKnown RBP9.51□□□□□ -0.89
LINC01001-201ENST00000526704 CEACAM4O75871 244 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 GATA2P23769 480 aaPredicted RBP9.51□□□□□ -0.89
LINC01001-201ENST00000526704 TNFAIP6P98066 277 aaPredicted RBP9.51□□□□□ -0.89
LINC01001-201ENST00000526704 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 MMD2Q8IY49 270 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 A8MXE2 369 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 ESDP10768 282 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 Q6ZWC4 215 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 SLC35E1Q96K37 410 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 TMEM208Q9BTX3 173 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 TMEM167BQ9NRX6 74 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 SLC35D1Q9NTN3 355 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 RPUSD1Q9UJJ7 312 aaKnown RBP9.51□□□□□ -0.89
LINC01001-201ENST00000526704 OTOGLQ3ZCN5 2332 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 CACNA1HO95180 2353 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 NAV3Q8IVL0 2385 aa9.51□□□□□ -0.89
LINC01001-201ENST00000526704 M0QZK8 103 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 LINC00614P0C842 121 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 SAA1P0DJI8 122 aaPredicted RBP9.5□□□□□ -0.89
LINC01001-201ENST00000526704 CRYBB3P26998 211 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 OR10J1P30954 320 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 IER3P46695 156 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 GNG4P50150 75 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 RTL8BQ17RB0 113 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 C2orf83Q53S99 150 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 ARFGEF3Q5TH69 2177 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 GGTLC3B5MD39 225 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 F2Z2F3 143 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 SERF1AO75920 110 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 OR5G3P0C626 314 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 OR10J4P0C629 311 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
LINC01001-201ENST00000526704 CRISP2P16562 243 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 C22orf34Q6ZV56 151 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 OR8I2Q8N0Y5 310 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 CBLN4Q9NTU7 201 aa9.5□□□□□ -0.89
LINC01001-201ENST00000526704 TECRQ9NZ01 308 aaKnown RBP9.5□□□□□ -0.89
LINC01001-201ENST00000526704 HELTA6NFD8 242 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 SNURFLB1AK76 121 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 TM4SF5O14894 197 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 CD33P20138 364 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 PQLC2Q6ZP29 291 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
LINC01001-201ENST00000526704 DOLPP1Q86YN1 238 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 OR9G1Q8NH87 305 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 RND1Q92730 232 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 TMEM106BQ9NUM4 274 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 BET1LQ9NYM9 111 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 LAMA5O15230 3695 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 DMXL1Q9Y485 3027 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 FCN1O00602 326 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 OR7C2O60412 319 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 TPPP2P59282 170 aa9.49□□□□□ -0.89
LINC01001-201ENST00000526704 MLANAQ16655 118 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms