RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 FAM209BQ5JX69 171 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 SLC16A13Q7RTY0 426 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 OR4D10Q8NGI6 311 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 OR2A7Q96R45 310 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 EHFQ9NZC4 300 aa10.55□□□□□ -0.72
CPSF1-201ENST00000526271 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
CPSF1-201ENST00000526271 M0QYG6 137 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 RAB3DO95716 219 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 CLEC3BP05452 202 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 IL7P13232 177 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 AP3S2P59780 193 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 MEF2DQ14814 521 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 RNASE10Q5GAN6 216 aaKnown RBP10.54□□□□□ -0.72
CPSF1-201ENST00000526271 SSX9Q7RTT3 188 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 TOMM5Q8N4H5 51 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 ARRDC1Q8N5I2 433 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
CPSF1-201ENST00000526271 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 SPRY2O43597 315 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 CREBL2O60519 120 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-201ENST00000526271 ACTL6BO94805 426 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 PPYP01298 95 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 GPR183P32249 361 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 MFAP2P55001 183 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 OR2B8PP59922 312 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF124Q15973 351 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF585BQ52M93 769 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 TRIQKQ629K1 86 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 Q6ZWC4 215 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 LHFPL1Q86WI0 220 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 OR4C16Q8NGL9 310 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF2Q9BSG1 426 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-201ENST00000526271 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-201ENST00000526271 HRASLSQ9HDD0 168 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 TP53TG1Q9Y2A0 90 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 PKD1P98161 4303 aa10.53□□□□□ -0.72
CPSF1-201ENST00000526271 FCGR2BP31994 310 aaPredicted RBP10.52□□□□□ -0.73
CPSF1-201ENST00000526271 TSPAN5P62079 268 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 AADACL3Q5VUY0 350 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 SLC25A42Q86VD7 318 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 TMEM17Q86X19 198 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 MOB3AQ96BX8 217 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 RNF183Q96D59 192 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 TSC22D3Q99576 134 aa10.52□□□□□ -0.73
CPSF1-201ENST00000526271 TRAV25A0A0B4J276 109 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 DISC1C4P0D8 188 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 PLA2G10O15496 165 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 UPK1BO75841 260 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 SLC22A5O76082 557 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 ATF4P18848 351 aaPredicted RBP10.51□□□□□ -0.73
CPSF1-201ENST00000526271 UCP3P55916 312 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 IFITM3Q01628 133 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 MSMO1Q15800 293 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 FAM106AQ4KMX7 169 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 OR4A47Q6IF82 309 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 FAAP20Q6NZ36 180 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 OR10W1Q8NGF6 305 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 OR1L6Q8NGR2 347 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 OR4S2Q8NH73 311 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 TERB2Q8NHR7 220 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 TCTEX1D2Q8WW35 142 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 TMEM190Q8WZ59 177 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 EEF1AKMT3Q96AZ1 226 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 PRELID3BQ9Y3B1 194 aa10.51□□□□□ -0.73
CPSF1-201ENST00000526271 IGHV3OR16-8A0A075B7F1 116 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 NAP1L6A6NFF2 107 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 TSPAN4O14817 238 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 TNFSF12O43508 249 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 RPA2P15927 270 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 HLA-GP17693 338 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 BMI1P35226 326 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 ADMP35318 185 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 MAS1LP35410 378 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 FAUP35544 74 aaKnown RBP10.5□□□□□ -0.73
CPSF1-201ENST00000526271 INPP1P49441 399 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 RPL8P62917 257 aaKnown RBP10.5□□□□□ -0.73
CPSF1-201ENST00000526271 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 HSD17B10Q99714 261 aaKnown RBP10.5□□□□□ -0.73
CPSF1-201ENST00000526271 PRRT1Q99946 306 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 C7orf50Q9BRJ6 194 aaKnown RBP10.5□□□□□ -0.73
CPSF1-201ENST00000526271 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 C5orf66Q9H5L9 145 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 BET1LQ9NYM9 111 aa10.5□□□□□ -0.73
CPSF1-201ENST00000526271 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
CPSF1-201ENST00000526271 AGRNO00468 2067 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
CPSF1-201ENST00000526271 GNRHRP30968 328 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 FXYD4P59646 89 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 HERV-K104P61576 105 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 WT1-ASQ06250 92 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 LGALS9CQ6DKI2 356 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 LPCAT3Q6P1A2 487 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 ZBTB34Q8NCN2 500 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 OR51S1Q8NGJ8 323 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 OR13C8Q8NGS7 320 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms