RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 MIAQ16674 131 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 SPANXN3Q5MJ09 141 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 ZNF705AQ6ZN79 300 aaPredicted RBP2.89□□□□□ -1.95
USP47-206ENST00000525367 ZNF767PQ75MW2 155 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 CROCCP2Q86T23 111 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 OR10D4PQ8NGN7 298 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 CLDND2Q8NHS1 167 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 SMCR5Q8TEV8 140 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 TTTY13Q9BZ97 58 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 RNF122Q9H9V4 155 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 LRTM1Q9HBL6 345 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 SLC39A9Q9NUM3 307 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 TXNL4BQ9NX01 149 aaKnown RBP2.89□□□□□ -1.95
USP47-206ENST00000525367 AMMECR1Q9Y4X0 333 aaPredicted RBP2.89□□□□□ -1.95
USP47-206ENST00000525367 HEY1Q9Y5J3 304 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 CABIN1Q9Y6J0 2220 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 BRWD3Q6RI45 1802 aa2.89□□□□□ -1.95
USP47-206ENST00000525367 IGKV2-28A0A075B6P5 120 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 IGKV1D-43A0A0B4J1Z2 117 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 TRAV41A0A0B4J266 112 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 COLCA2A8K830 154 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 H3BPC8 53 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 CREBL2O60519 120 aaPredicted RBP2.88□□□□□ -1.95
USP47-206ENST00000525367 CST8O60676 142 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 SOD1P00441 154 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 IGKV2D-28P01615 120 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 GZMBP10144 247 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 LCA10Q71F78 164 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 TRAPPC6BQ86SZ2 158 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 EXOC3-AS1Q8N2X6 119 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 NUP35Q8NFH5 326 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 OR9Q1Q8NGQ5 310 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 RMND5BQ96G75 393 aaPredicted RBP2.88□□□□□ -1.95
USP47-206ENST00000525367 HSPB9Q9BQS6 159 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 SPANXCQ9NY87 97 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 DENND4BO75064 1496 aaPredicted RBP2.88□□□□□ -1.95
USP47-206ENST00000525367 NEO1Q92859 1461 aa2.88□□□□□ -1.95
USP47-206ENST00000525367 DICER1Q9UPY3 1922 aaKnown RBP2.87□□□□□ -1.95
USP47-206ENST00000525367 A0A1B0GU33 70 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 A0A1W2PQD3 144 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 TMEM235A6NFC5 223 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 TRAPPC2LH3BP13 241 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 KPNA4O00629 521 aaPredicted RBP2.87□□□□□ -1.95
USP47-206ENST00000525367 CYB5BO43169 146 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 SYNGR2O43760 224 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 CSN2P05814 226 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 UCHL1P09936 223 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 GZMHP20718 246 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 CD24P25063 80 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 HLA-DMBP28068 263 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 CA5AP35218 305 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 XCL1P47992 114 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 YPEL3P61236 119 aaPredicted RBP2.87□□□□□ -1.95
USP47-206ENST00000525367 RPS11P62280 158 aaKnown RBP eCLIP2.87□□□□□ -1.95
USP47-206ENST00000525367 EBI3Q14213 229 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.87□□□□□ -1.95
USP47-206ENST00000525367 TMEM136Q6ZRR5 245 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 DNAJC9Q8WXX5 260 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 BORCS5Q969J3 196 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 OR8B2Q96RD0 313 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 OR2J1Q9GZK6 312 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 TUBA4BQ9H853 241 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 CKLFQ9UBR5 152 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 TP73-AS1Q9UF72 201 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 DSCAML1Q8TD84 2053 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 TICRRQ7Z2Z1 1910 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 CHD5Q8TDI0 1954 aa2.87□□□□□ -1.95
USP47-206ENST00000525367 SETD5Q9C0A6 1442 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 IGHV3-15A0A0B4J1V0 119 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 A0A0J9YW62 118 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 C17orf98A8MV24 154 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 PSCAO43653 123 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 FAM107AO95990 144 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 OGNP20774 298 aaKnown RBP2.86□□□□□ -1.95
USP47-206ENST00000525367 ZNF80P51504 273 aaPredicted RBP2.86□□□□□ -1.95
USP47-206ENST00000525367 FLI1Q01543 452 aaPredicted RBP2.86□□□□□ -1.95
USP47-206ENST00000525367 BAMBIQ13145 260 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 EIF4EBP1Q13541 118 aaPredicted RBP2.86□□□□□ -1.95
USP47-206ENST00000525367 ZNF141Q15928 474 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 LTC4SQ16873 150 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 RRN3P1Q2M238 152 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 FAM229BQ4G0N7 80 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 DNLZQ5SXM8 178 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 AMMECR1LQ6DCA0 310 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 DHFR2Q86XF0 187 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 LYPD6Q86Y78 171 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 Q8NAQ8 132 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 OR5C1Q8NGR4 320 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 OR5J2Q8NH18 312 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 CAPZA3Q96KX2 299 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 TM2D3Q9BRN9 247 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 AICDAQ9GZX7 198 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 FAM107BQ9H098 131 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 C16orf95Q9H693 158 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 PCM1Q15154 2024 aa2.86□□□□□ -1.95
USP47-206ENST00000525367 UHRF1BP1Q6BDS2 1440 aa2.85□□□□□ -1.95
USP47-206ENST00000525367 TRIP11Q15643 1979 aa2.85□□□□□ -1.95
USP47-206ENST00000525367 ADAMTSL1Q8N6G6 1762 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms