RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
TRAPPC4-204ENST00000524797 ALG5Q9Y673 324 aa8.49□□□□□ -1.05
TRAPPC4-204ENST00000524797 H0Y980 276 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 GGCTO75223 188 aaKnown RBP8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 RRAS2P62070 204 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 PXDC1Q5TGL8 231 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 LPCAT3Q6P1A2 487 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 ADAMTSL5Q6ZMM2 481 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 FCAMRQ8WWV6 532 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 EEF1AKMT3Q96AZ1 226 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 DIRAS2Q96HU8 199 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 CCDC140Q96MF4 163 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 EXTL2Q9UBQ6 330 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 S4R3C0 116 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 TEX50A0A1B0GTY4 177 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 MARCH11A6NNE9 402 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 ATF4P18848 351 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 UCP3P55916 312 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 TRIQKQ629K1 86 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 CLEC19AQ6UXS0 136 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 SBSPONQ8IVN8 264 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 SGPP2Q8IWX5 399 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 Q8N402 240 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 DUSP18Q8NEJ0 188 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 OR2K2Q8NGT1 345 aa8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 THAP7Q9BT49 309 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 QTRT1Q9BXR0 403 aaKnown RBP8.48□□□□□ -1.05
TRAPPC4-204ENST00000524797 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 M0QYG6 137 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 PLA2G10O15496 165 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 TSC22D2O75157 780 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 DEFA4P12838 97 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 G6PCP35575 357 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 ARL3P36405 182 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 LCN12Q6JVE5 192 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 TBC1D26Q86UD7 250 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 OR1L8Q8NGR8 309 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 OR52I2Q8NH67 350 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 MIXL1Q9H2W2 232 aa8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 FAM212BQ9NTI7 297 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC4-204ENST00000524797 FAM240BA0A1B0GVZ2 78 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 MFSD2BA6NFX1 497 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 LGALS9O00182 355 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 OR2C1O95371 312 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 KRASP01116 189 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 HLA-AP01891 365 aaKnown RBP8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 S100GP29377 79 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 GPHB5Q86YW7 130 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 C9orf62Q8N4C0 152 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 ZC4H2Q9NQZ6 224 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 NDUFA4L2Q9NRX3 87 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 MCUBQ9NWR8 336 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 NSG2Q9Y328 171 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 OR51B2Q9Y5P1 312 aa8.46□□□□□ -1.05
TRAPPC4-204ENST00000524797 TRBV7-1A0A0A6YYK4 115 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 C2orf70A6NJV1 201 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 A8MZ25 164 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 SNAPC5O75971 98 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 IGHV4-30-4P0DP06 118 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 EDN2P20800 178 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 INPP1P49441 399 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 WT1-ASQ06250 92 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 TEX261Q6UWH6 196 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 HSD17B13Q7Z5P4 300 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 LHFPL1Q86WI0 220 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 CXorf58Q96LI9 332 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 ABHD1Q96SE0 405 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 KLK11Q9UBX7 282 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 MTFP1Q9UDX5 166 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 U3KQ87 197 aa8.46□□□□□ -1.06
TRAPPC4-204ENST00000524797 LYRM1O43325 122 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 SCO1O75880 301 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 IGKV1-39P01597 117 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 IGKV1D-39P04432 117 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 SERPINE2P07093 398 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 OR13C7P0DN81 318 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 PTBP1P26599 531 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 RND3P61587 244 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 ZNF124Q15973 351 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 RNASE10Q5GAN6 216 aaKnown RBP8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 ZNF680Q8NEM1 530 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 ZNF502Q8TBZ5 544 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 DYNLRB2Q8TF09 96 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 LSM10Q969L4 123 aaKnown RBP8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 MARVELD1Q9BSK0 173 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 HINT2Q9BX68 163 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 PRNDQ9UKY0 176 aa8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 HUWE1Q7Z6Z7 4374 aaKnown RBP8.45□□□□□ -1.06
TRAPPC4-204ENST00000524797 PCP4L1A6NKN8 68 aa8.44□□□□□ -1.06
TRAPPC4-204ENST00000524797 CYB5BO43169 146 aa8.44□□□□□ -1.06
TRAPPC4-204ENST00000524797 IFNA7P01567 189 aa8.44□□□□□ -1.06
TRAPPC4-204ENST00000524797 CD3DP04234 171 aa8.44□□□□□ -1.06
TRAPPC4-204ENST00000524797 IFNA6P05013 189 aa8.44□□□□□ -1.06
TRAPPC4-204ENST00000524797 FOLR2P14207 255 aa8.44□□□□□ -1.06
TRAPPC4-204ENST00000524797 PGAM2P15259 253 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms