RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 MCRIP2Q9BUT9 160 aaKnown RBP10.82□□□□□ -0.68
CAPN1-202ENST00000524773 HES4Q9HCC6 221 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 NPVFQ9HCQ7 196 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 NAV3Q8IVL0 2385 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 SP1P08047 785 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 RHOBP62745 196 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 FAM214BQ7L5A3 538 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 NANOS1Q8WY41 292 aaKnown RBP10.82□□□□□ -0.68
CAPN1-202ENST00000524773 S1PR3Q99500 378 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
CAPN1-202ENST00000524773 LSM4Q9Y4Z0 139 aaKnown RBP10.82□□□□□ -0.68
CAPN1-202ENST00000524773 NPY1RP25929 384 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 PRDX2P32119 198 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 CTRLP40313 264 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 OR9G1Q8NH87 305 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 SFXN3Q9BWM7 321 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 SELENOKQ9Y6D0 94 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 ZZEF1O43149 2961 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 LNP1A1A4G5 178 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 PLAUP00749 431 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 ZNF883P0CG24 379 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 IGLC2P0DOY2 106 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 IGLC3P0DOY3 106 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 ACP1P24666 158 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 CAMPP49913 170 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 VHLLQ6RSH7 139 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 SLC24A4Q8NFF2 622 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 SNRNP40Q96DI7 357 aaKnown RBP10.81□□□□□ -0.68
CAPN1-202ENST00000524773 CLEC7AQ9BXN2 247 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 ZNF355PQ9NSJ1 428 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 ZNF318Q5VUA4 2279 aa10.81□□□□□ -0.68
CAPN1-202ENST00000524773 IQCF6A8MYZ5 107 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 MRPL49Q13405 166 aaKnown RBP10.8□□□□□ -0.68
CAPN1-202ENST00000524773 OR4A47Q6IF82 309 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 DEFB108BQ8NET1 73 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 OR10W1Q8NGF6 305 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 KCNS1Q96KK3 526 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 RNF2Q99496 336 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 NABP2Q9BQ15 211 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 LAMTOR2Q9Y2Q5 125 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 TIMM8BQ9Y5J9 83 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-202ENST00000524773 PLCE1Q9P212 2302 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 TANC2Q9HCD6 1990 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 IGKV1D-17A0A075B6S4 117 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 LINC00869P0C866 280 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 RPL8P62917 257 aaKnown RBP10.8□□□□□ -0.68
CAPN1-202ENST00000524773 SSBP2P81877 361 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-202ENST00000524773 Q0VG73 95 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 TNXAQ16473 311 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 VWA1Q6PCB0 445 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 SPATA12Q7Z6I5 190 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 CLEC5AQ9NY25 188 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 TRGV10A0A0A0MS01 117 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 ZNF324O75467 553 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-202ENST00000524773 GAGE1Q13065 139 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 IBA57Q5T440 356 aaKnown RBP10.8□□□□□ -0.68
CAPN1-202ENST00000524773 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 RND1Q92730 232 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 TRIB1Q96RU8 372 aa10.8□□□□□ -0.68
CAPN1-202ENST00000524773 DYSFO75923 2080 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 CORTO00230 105 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 PYYP10082 97 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 ESDP10768 282 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 CX3CL1P78423 397 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 LYG1Q8N1E2 194 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 LOXL4Q96JB6 756 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
CAPN1-202ENST00000524773 RPH3ALQ9UNE2 315 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 INTS1Q8N201 2190 aaKnown RBP10.79□□□□□ -0.68
CAPN1-202ENST00000524773 IGKV1-16P04430 117 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 USF1P22415 310 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-202ENST00000524773 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 OR52E5Q8NH55 327 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 ZC2HC1AQ96GY0 325 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 GNB1LQ9BYB4 327 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 RNF24Q9Y225 148 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 CBY1Q9Y3M2 126 aa10.79□□□□□ -0.68
CAPN1-202ENST00000524773 H3BTX0 84 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 MPDU1O75352 247 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 IGLV2-8P01709 118 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 TIGITQ495A1 244 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 RNASEKQ6P5S7 137 aaKnown RBP10.78□□□□□ -0.68
CAPN1-202ENST00000524773 SAA2-SAA4A0A096LPE2 208 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 H0Y8G0 127 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 APCSP02743 223 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 SAA2P0DJI9 122 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-202ENST00000524773 RPP30P78346 268 aaKnown RBP10.78□□□□□ -0.68
CAPN1-202ENST00000524773 RNF151Q2KHN1 245 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 SMIM21Q3B7S5 101 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 OR2T6Q8NHC8 308 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 CXXC4Q9H2H0 198 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms