RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 CA13Q8N1Q1 262 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 LINC00469Q8N7U9 141 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 OR51D1Q8NGF3 324 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 OTOSQ8NHW6 89 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 SFT2D1Q8WV19 159 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 AQP3Q92482 292 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TMEM106AQ96A25 262 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 MALSU1Q96EH3 234 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 SMIM8Q96KF7 97 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 FAM19A4Q96LR4 140 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 Q96M85 177 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 ZNF75AQ96N20 296 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 C18orf15Q96N68 181 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 AQP10Q96PS8 301 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 NMNAT3Q96T66 252 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TSNAXQ99598 290 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 ZNF251Q9BRH9 671 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TCEAL7Q9BRU2 100 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TTTY10Q9BZA0 68 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 CHST6Q9GZX3 395 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 CYTL1Q9NRR1 136 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 COMMD9Q9P000 198 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 SIGLEC9Q9Y336 463 aa3.53□□□□□ -1.84
SKP1-213ENST00000524288 TNRC6BQ9UPQ9 1833 aaKnown RBP3.53□□□□□ -1.84
SKP1-213ENST00000524288 GOLGA4Q13439 2230 aaKnown RBP3.52□□□□□ -1.85
SKP1-213ENST00000524288 TMEM72A0PK05 275 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 C9orf170A2RU37 121 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 COLCA2A8K830 154 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ZNF736B4DX44 427 aaPredicted RBP3.52□□□□□ -1.85
SKP1-213ENST00000524288 C10orf142B7Z368 130 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 LINC01619G3V211 115 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 M0R1X1 148 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 MFNGO00587 321 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 CYB5AP00167 134 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 STATHP02808 62 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 IGKV3-11P04433 115 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ISG15P05161 165 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 CD5P06127 495 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 GABRA3P34903 492 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 SLC35A1P78382 337 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 QRFPP83859 136 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 DEFA5Q01523 94 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 IL15RAQ13261 267 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 SKP2Q13309 424 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 FAM53BQ14153 422 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ZNHIT3Q15649 155 aaPredicted RBP3.52□□□□□ -1.85
SKP1-213ENST00000524288 HMGN3Q15651 99 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 CST6Q15828 149 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 CDNFQ49AH0 187 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 DEFB134Q4QY38 66 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ACTBL2Q562R1 376 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 DNLZQ5SXM8 178 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 PRSS54Q6PEW0 395 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 DEGS2Q6QHC5 323 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 BAP18Q8IXM2 172 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ZNF676Q8N7Q3 588 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 OR4K17Q8NGC6 315 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 OR52R1Q8NGF1 315 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 OR10AC1Q8NH08 325 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 LINC01560Q8TB33 94 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 PPP1R1CQ8WVI7 109 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 LCN9Q8WX39 176 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 TSPAN32Q96QS1 320 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 OR2M4Q96R27 311 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 PHB2Q99623 299 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 RSG1Q9BU20 258 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 NUDT9Q9BW91 350 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ZNF471Q9BX82 626 aaPredicted RBP3.52□□□□□ -1.85
SKP1-213ENST00000524288 CST11Q9H112 138 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 TUBA4BQ9H853 241 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 UQCC1Q9NVA1 299 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 ASF1BQ9NVP2 202 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 METTL1Q9UBP6 276 aaKnown RBP3.52□□□□□ -1.85
SKP1-213ENST00000524288 ZNF230Q9UIE0 474 aaPredicted RBP3.52□□□□□ -1.85
SKP1-213ENST00000524288 ARID1AO14497 2285 aa3.52□□□□□ -1.85
SKP1-213ENST00000524288 A0A0J9YY10 115 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 A0A1B0GW64 132 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 OR2AT4A6NND4 320 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 H0YGG7 62 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 TAAR5O14804 337 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 YKT6O15498 198 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 GATCO43716 136 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 ENSAO43768 121 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 EIF1BO60739 113 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 ALOX12BO75342 701 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 IGHV3-11P01762 117 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 HLA-AP01891 365 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 CLPSP04118 112 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 CRYBA1P05813 215 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 CD2P06729 351 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 PSMB6P28072 239 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 HSD11B1P28845 292 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 GNRHRP30968 328 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 APLNRP35414 380 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 EIF1P41567 113 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 CXCL12P48061 93 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 SULT1A2P50226 295 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 RAB5BP61020 215 aa3.51□□□□□ -1.85
SKP1-213ENST00000524288 EIF5AP63241 154 aaKnown RBP3.51□□□□□ -1.85
SKP1-213ENST00000524288 RPL18Q07020 188 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms