RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 MFSD2BA6NFX1 497 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 INS-IGF2F8WCM5 200 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 H3BMQ9 156 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 GSTZ1O43708 216 aaPredicted RBP13.06□□□□□ -0.32
CCNC-213ENST00000523541 HLA-AP01891 365 aaKnown RBP13.06□□□□□ -0.32
CCNC-213ENST00000523541 AKAIN1P0CW23 69 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 ERHP84090 104 aaKnown RBP13.06□□□□□ -0.32
CCNC-213ENST00000523541 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 ADAMTSL5Q6ZMM2 481 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 ZNF114Q8NC26 417 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 MRGPRFQ96AM1 343 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 ISOC1Q96CN7 298 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 PRRT1Q99946 306 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 NXF2Q9GZY0 626 aaKnown RBP13.06□□□□□ -0.32
CCNC-213ENST00000523541 ZC4H2Q9NQZ6 224 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 UFC1Q9Y3C8 167 aa13.06□□□□□ -0.32
CCNC-213ENST00000523541 HUWE1Q7Z6Z7 4374 aaKnown RBP13.05□□□□□ -0.32
CCNC-213ENST00000523541 ZNF320A2RRD8 509 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 TGOLN2O43493 480 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
CCNC-213ENST00000523541 SCGB2B2Q4G0G5 96 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 OR2C3Q8N628 320 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 OR4D10Q8NGI6 311 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 SCGB3A2Q96PL1 93 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 TXN2Q99757 166 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 SOSTQ9BQB4 213 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 ZNF436Q9C0F3 470 aaPredicted RBP13.05□□□□□ -0.32
CCNC-213ENST00000523541 C6orf62Q9GZU0 229 aaPredicted RBP13.05□□□□□ -0.32
CCNC-213ENST00000523541 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 C21orf62Q9NYP8 219 aa13.05□□□□□ -0.32
CCNC-213ENST00000523541 MRPL27Q9P0M9 148 aaKnown RBP13.05□□□□□ -0.32
CCNC-213ENST00000523541 C14orf166Q9Y224 244 aaKnown RBP13.05□□□□□ -0.32
CCNC-213ENST00000523541 FABP12A6NFH5 140 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 DBX1A6NMT0 343 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 C8orf88P0DMB2 117 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 PI3P19957 117 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 UCP1P25874 307 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
CCNC-213ENST00000523541 GPR183P32249 361 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 GUCA2BQ16661 112 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 FAM219AQ8IW50 185 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 OR13C8Q8NGS7 320 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 MARCH1Q8TCQ1 289 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 SCARB1Q8WTV0 552 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 TP53RKQ96S44 253 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 CACFD1Q9UGQ2 172 aa13.04□□□□□ -0.32
CCNC-213ENST00000523541 TRAV25A0A0B4J276 109 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 ANKRD20A5PA0PJZ0 165 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 TMEM213A2RRL7 107 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 IZUMO1RA6ND01 250 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 CDS2O95674 445 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 P0C879 139 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 TNFSF8P32971 234 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 PPP5CP53041 499 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 MFAP2P55001 183 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 DHODHQ02127 395 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 ANKRD55Q3KP44 614 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 MCFD2Q8NI22 146 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 RRNAD1Q96FB5 475 aaKnown RBP13.03□□□□□ -0.32
CCNC-213ENST00000523541 TM2D3Q9BRN9 247 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 PLEKHA3Q9HB20 300 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 SCP2D1Q9UJQ7 156 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 GPR132Q9UNW8 380 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 CEPT1Q9Y6K0 416 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 STAB2Q8WWQ8 2551 aa13.03□□□□□ -0.32
CCNC-213ENST00000523541 K7EIM0 57 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 NDUFA4O00483 81 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 AKR1C2P52895 323 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 CD81P60033 236 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 TRIM16LQ309B1 348 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
CCNC-213ENST00000523541 UXS1Q8NBZ7 420 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 RTBDNQ9BSG5 229 aaPredicted RBP13.02□□□□□ -0.33
CCNC-213ENST00000523541 PDCD10Q9BUL8 212 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 TMEM222Q9H0R3 208 aa13.02□□□□□ -0.33
CCNC-213ENST00000523541 A0A0B4J293 547 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 TEX13DA0A0J9YY54 714 aaPredicted RBP13.01□□□□□ -0.33
CCNC-213ENST00000523541 K7EMT4 169 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 ZNF701M0R085 212 aaPredicted RBP13.01□□□□□ -0.33
CCNC-213ENST00000523541 IGKV1-5P01602 117 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 SUB1P53999 127 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCNC-213ENST00000523541 MFAP4P55083 255 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 OR4C16Q8NGL9 310 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 DEDD2Q8WXF8 326 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 KCNIP3Q9Y2W7 256 aa13.01□□□□□ -0.33
CCNC-213ENST00000523541 PIGBOS1A0A0B4J2F0 54 aa13□□□□□ -0.33
CCNC-213ENST00000523541 OR2T8A6NH00 312 aa13□□□□□ -0.33
CCNC-213ENST00000523541 C3orf84H3BNL1 204 aa13□□□□□ -0.33
CCNC-213ENST00000523541 I3L2K1 104 aa13□□□□□ -0.33
CCNC-213ENST00000523541 SNCAP37840 140 aa13□□□□□ -0.33
CCNC-213ENST00000523541 RELQ04864 619 aaPredicted RBP13□□□□□ -0.33
CCNC-213ENST00000523541 AARDQ4LEZ3 155 aa13□□□□□ -0.33
CCNC-213ENST00000523541 TM4SF20Q53R12 229 aa13□□□□□ -0.33
CCNC-213ENST00000523541 UNQ9165/PRO28630Q6UXU0 137 aa13□□□□□ -0.33
CCNC-213ENST00000523541 SLC16A13Q7RTY0 426 aa13□□□□□ -0.33
CCNC-213ENST00000523541 OR52E5Q8NH55 327 aa13□□□□□ -0.33
CCNC-213ENST00000523541 GLYATL2Q8WU03 294 aa13□□□□□ -0.33
CCNC-213ENST00000523541 TMEM190Q8WZ59 177 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms