RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 PRELID1Q9Y255 219 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 PKIGQ9Y2B9 76 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 PRELID3BQ9Y3B1 194 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 UHRF1BP1LA0JNW5 1464 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 CCDC141Q6ZP82 1450 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 ARAP1Q96P48 1450 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 NLRP1Q9C000 1473 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 SHANK2Q9UPX8 1470 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 RALGAPA2Q2PPJ7 1873 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 CCDC144AA2RUR9 1427 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 FHAD1B1AJZ9 1412 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 SMG6Q86US8 1419 aaKnown RBP0.45□□□□□ -2.34
CLK4-213ENST00000523013 ADGRL3Q9HAR2 1447 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 LAMC1P11047 1609 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 SMARCA4P51532 1647 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 RNF17Q9BXT8 1623 aaKnown RBP0.45□□□□□ -2.34
CLK4-213ENST00000523013 SCN10AQ9Y5Y9 1956 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 EIF4G3O43432 1585 aaKnown RBP0.45□□□□□ -2.34
CLK4-213ENST00000523013 KDM5CP41229 1560 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 IQGAP2Q13576 1575 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 FRMPD1Q5SYB0 1578 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 REREQ9P2R6 1566 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 INO80Q9ULG1 1556 aaPredicted RBP0.45□□□□□ -2.34
CLK4-213ENST00000523013 MAST1Q9Y2H9 1570 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 ROCK1Q13464 1354 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 EIF3AQ14152 1382 aaKnown RBP0.45□□□□□ -2.34
CLK4-213ENST00000523013 MTUS2Q5JR59 1369 aa0.45□□□□□ -2.34
CLK4-213ENST00000523013 PTPRSQ13332 1948 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 GREB1Q4ZG55 1949 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 CDC42BPAQ5VT25 1732 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 MYO5CQ9NQX4 1742 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 EFCAB5A4FU69 1503 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 EPRSP07814 1512 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 ZMYM4Q5VZL5 1548 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 ABCA10Q8WWZ4 1543 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 SYCP2Q9BX26 1530 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 DOCK5Q9H7D0 1870 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 KDM5AP29375 1690 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 MYOM1P52179 1685 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 CUL7Q14999 1698 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 ZC3H13Q5T200 1668 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 QRICH2Q9H0J4 1663 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 THSD7AQ9UPZ6 1657 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 POLA1P09884 1462 aaPredicted RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 CAMSAP2Q08AD1 1489 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 SNAPC4Q5SXM2 1469 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TEX14Q8IWB6 1497 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 WDR7Q9Y4E6 1490 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 SIPA1L1O43166 1804 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TRBV20OR9-2A0A075B6H5 130 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 A0A0J9YW62 118 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 FAM236DA0A1B0GTK5 79 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 PQLC2LA1A4F0 135 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TMEM235A6NFC5 223 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 UBE2L6O14933 153 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 LEPROTO15243 131 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 OR7C1O76099 320 aaPredicted RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 HLA-DRB1P01911 266 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TNNC2P02585 160 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 C1QAP02745 245 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 PRM2P04554 102 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 SRP19P09132 144 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 FAM236CP0DP71 79 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 CD79AP11912 226 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 NEFHP12036 1026 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 KCNE1P15382 129 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 G6PCP35575 357 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 CCR2P41597 374 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 RPL27AP46776 148 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 HINT1P49773 126 aaPredicted RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 GTF2A1P52655 376 aaPredicted RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 TAS2R20P59543 309 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 RPS20P60866 119 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 PSME3P61289 254 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 ARF6P62330 175 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 HIST1H3AP68431 136 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 SARNPP82979 210 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 H3F3AP84243 136 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 RUNX1Q01196 453 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 CAV1Q03135 178 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 CDK10Q15131 360 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TMEM97Q5BJF2 176 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 C9orf64Q5T6V5 341 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TMEM42Q69YG0 159 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 LPCAT3Q6P1A2 487 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 C5orf46Q6UWT4 87 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 C10orf126Q8N4M7 172 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 OR5B17Q8NGF7 314 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 C12orf43Q96C57 262 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 ROPN1LQ96C74 230 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 MRPS24Q96EL2 167 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 PAIP2Q9BPZ3 127 aaKnown RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 CCDC94Q9BW85 323 aaPredicted RBP0.44□□□□□ -2.34
CLK4-213ENST00000523013 ULBP3Q9BZM4 244 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 C20orf27Q9GZN8 174 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 TLNRD1Q9H1K6 362 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 DCSTAMPQ9H295 470 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 VCX3BQ9H321 246 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 UQCC1Q9NVA1 299 aa0.44□□□□□ -2.34
CLK4-213ENST00000523013 PAQR5Q9NXK6 330 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms