RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ERVFC1-1P60608 527 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 SNRPGP62308 76 aaKnown RBP4.46□□□□□ -1.7
VPS13B-211ENST00000522802 CBX3Q13185 183 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 KLK9Q2XQG4 91 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 LAMTOR1Q6IAA8 161 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 PLET1Q6UQ28 207 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 SPATA24Q86W54 205 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 AQP12AQ8IXF9 295 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 C6orf223Q8N319 242 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 NEDD4LQ96PU5 975 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 C20orf24Q9BUV8 137 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 AK3Q9UIJ7 227 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 KLK9Q9UKQ9 250 aa4.46□□□□□ -1.7
VPS13B-211ENST00000522802 A0A0A6YYD4 124 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 TRBV6-6A0A0A6YYG2 114 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 TRBV5-5A0A0J9YX44 114 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 TCRBV3S1A0A5B6 114 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 TGOLN2O43493 480 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 CREBL2O60519 120 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 MRPS14O60783 128 aaKnown RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 KBTBD11O94819 623 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 LALBAP00709 142 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 ZNF735P0CB33 412 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 GSTT2P0CG29 244 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 GSTT2BP0CG30 244 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 LIMS3P0CW19 117 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 LIMS4P0CW20 117 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 RPL27AP46776 148 aaKnown RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 RPS11P62280 158 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 RELQ04864 619 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 MRPL28Q13084 256 aaKnown RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 UNC119Q13432 240 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 RNF212Q495C1 297 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 OR2B11Q5JQS5 317 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 MMD2Q8IY49 270 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 CENPSQ8N2Z9 138 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 OR6M1Q8NGM8 313 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 GIMAP1Q8WWP7 306 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 GGHQ92820 318 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 MRPL48Q96GC5 212 aaKnown RBP4.45□□□□□ -1.7
VPS13B-211ENST00000522802 CXorf58Q96LI9 332 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 OR2A7Q96R45 310 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 Q9N2K0 584 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 C12orf4Q9NQ89 552 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 SLC2A9Q9NRM0 540 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 MDFICQ9P1T7 246 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 CKLFQ9UBR5 152 aa4.45□□□□□ -1.7
VPS13B-211ENST00000522802 IGHV3OR16-13A0A075B7E8 117 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 IGHV3-74A0A0B4J1X5 117 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 CHEK1O14757 476 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 BET1O15155 118 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 DUTP33316 252 aaKnown RBP4.44□□□□□ -1.7
VPS13B-211ENST00000522802 XGP55808 180 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 DEFB131AP59861 70 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 RPL36AP83881 106 aaKnown RBP4.44□□□□□ -1.7
VPS13B-211ENST00000522802 FLOT2Q14254 428 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 ATP6AP1Q15904 470 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 IGSF11Q5DX21 431 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 MORN3Q6PF18 240 aaPredicted RBP4.44□□□□□ -1.7
VPS13B-211ENST00000522802 LYPD1Q8N2G4 141 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 ZFP41Q8N8Y5 198 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 CSNK1G2-AS1Q8NCQ2 148 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 OR52I1Q8NGK6 324 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 THAP6Q8TBB0 222 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 SMIM19Q96E16 107 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 TMEM59Q9BXS4 323 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 YTHDF1Q9BYJ9 559 aaKnown RBP4.44□□□□□ -1.7
VPS13B-211ENST00000522802 AMBNQ9NP70 447 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 TBC1D24Q9ULP9 559 aa4.44□□□□□ -1.7
VPS13B-211ENST00000522802 IGHV3-21A0A0B4J1V1 117 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 IGHV7-4-1A0A0J9YVY3 117 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 IGLC7A0M8Q6 106 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 KNCNA6PVL3 124 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 NDUFA4O00483 81 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 SOCS1O15524 211 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 FCGR3BO75015 233 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 DHFRP00374 187 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 RRASP10301 218 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 DEFA4P12838 97 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 HTN3P15516 51 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 HIST1H1BP16401 226 aaKnown RBP4.43□□□□□ -1.7
VPS13B-211ENST00000522802 GABRB1P18505 474 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 SRMP19623 302 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 PSMD7P51665 324 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 IRF3Q14653 427 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 Q499Y3 187 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 RPL22L1Q6P5R6 122 aaKnown RBP4.43□□□□□ -1.7
VPS13B-211ENST00000522802 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 TMEM167AQ8TBQ9 72 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 FRZBQ92765 325 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 PGLYRP3Q96LB9 341 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 RHPN1-AS1Q9BWJ2 59 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 TM2D1Q9BX74 207 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 TMEM14BQ9NUH8 114 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 PLEKHJ1Q9NW61 149 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms