RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
CLK4-211ENST00000522556 GPR183P32249 361 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 ARL3P36405 182 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 SUPT4H1P63272 117 aaKnown RBP13.59□□□□□ -0.23
CLK4-211ENST00000522556 PRCDQ00LT1 54 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 THOC7Q6I9Y2 204 aaKnown RBP13.59□□□□□ -0.23
CLK4-211ENST00000522556 C11orf87Q6NUJ2 197 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 SLC25A24Q6NUK1 477 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 TOMM5Q8N4H5 51 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 EEF1AKMT3Q96AZ1 226 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 OR4C12Q96R67 309 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 SCP2D1Q9UJQ7 156 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 SORL1Q92673 2214 aa13.59□□□□□ -0.23
CLK4-211ENST00000522556 IGHV3-35A0A0C4DH35 117 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 F8W735 103 aaPredicted RBP13.58□□□□□ -0.24
CLK4-211ENST00000522556 K7EIM0 57 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 CDS2O95674 445 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 IGLV1-51P01701 117 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.24
CLK4-211ENST00000522556 SPANXN2Q5MJ10 180 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 SELENOHQ8IZQ5 122 aaKnown RBP13.58□□□□□ -0.24
CLK4-211ENST00000522556 OR2C3Q8N628 320 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 CACNG8Q8WXS5 425 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 FKBP11Q9NYL4 201 aa13.58□□□□□ -0.24
CLK4-211ENST00000522556 LSM4Q9Y4Z0 139 aaKnown RBP13.58□□□□□ -0.24
CLK4-211ENST00000522556 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 AKR1C4P17516 323 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 TMEM187Q14656 261 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 TMEM268Q5VZI3 342 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 ZNF414Q96IQ9 312 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 TMEM56Q96MV1 263 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 ELOVL1Q9BW60 279 aa13.57□□□□□ -0.24
CLK4-211ENST00000522556 GGCTO75223 188 aaKnown RBP13.56□□□□□ -0.24
CLK4-211ENST00000522556 NXPH3O95157 252 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 IGHV3-48P01763 117 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 CLEC3BP05452 202 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 GP9P14770 177 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 ZNF57Q68EA5 555 aaPredicted RBP13.56□□□□□ -0.24
CLK4-211ENST00000522556 UNQ9165/PRO28630Q6UXU0 137 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 HSD17B13Q7Z5P4 300 aaPredicted RBP13.56□□□□□ -0.24
CLK4-211ENST00000522556 SLC35G3Q8N808 338 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 RNASE11Q8TAA1 199 aaKnown RBP13.56□□□□□ -0.24
CLK4-211ENST00000522556 SCARB1Q8WTV0 552 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 RBPMSQ93062 196 aaKnown RBP13.56□□□□□ -0.24
CLK4-211ENST00000522556 GPR146Q96CH1 333 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 PLEKHA3Q9HB20 300 aa13.56□□□□□ -0.24
CLK4-211ENST00000522556 TRBV7-1A0A0A6YYK4 115 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 CCR6P51684 374 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 AP3S2P59780 193 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 TMED4Q7Z7H5 227 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 SGPP2Q8IWX5 399 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 MISP3Q96FF7 219 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 CXorf58Q96LI9 332 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 CACNG5Q9UF02 275 aa13.55□□□□□ -0.24
CLK4-211ENST00000522556 TMEM213A2RRL7 107 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 OR2T8A6NH00 312 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 B3GALNT1O75752 331 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 FAUP35544 74 aaKnown RBP13.54□□□□□ -0.24
CLK4-211ENST00000522556 DHODHQ02127 395 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 OR1P1Q8NH06 330 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 RRNAD1Q96FB5 475 aaKnown RBP13.54□□□□□ -0.24
CLK4-211ENST00000522556 GALNT14Q96FL9 552 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 NDUFA13Q9P0J0 144 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
CLK4-211ENST00000522556 C2orf70A6NJV1 201 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 I3L2K1 104 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 IFNA17P01571 189 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 BTCP35070 178 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 ADMP35318 185 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 FAM209BQ5JX69 171 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 LYZL2Q7Z4W2 148 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 ZNF114Q8NC26 417 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 C21orf62Q9NYP8 219 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 THYN1Q9P016 225 aa13.53□□□□□ -0.24
CLK4-211ENST00000522556 DNAH9Q9NYC9 4486 aa13.52□□□□□ -0.24
CLK4-211ENST00000522556 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 TGOLN2O43493 480 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 ATG12O94817 140 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 RNASE2P10153 161 aaKnown RBP13.52□□□□□ -0.25
CLK4-211ENST00000522556 HOXA1P49639 335 aaPredicted RBP13.52□□□□□ -0.25
CLK4-211ENST00000522556 TM4SF20Q53R12 229 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 TRIQKQ629K1 86 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 GPHB5Q86YW7 130 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 UBAC2Q8NBM4 344 aa13.52□□□□□ -0.25
CLK4-211ENST00000522556 PINX1Q96BK5 328 aaKnown RBP13.52□□□□□ -0.25
CLK4-211ENST00000522556 ZMAT5Q9UDW3 170 aaKnown RBP13.52□□□□□ -0.25
CLK4-211ENST00000522556 COL7A1Q02388 2944 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 LGALS9O00182 355 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 MT-CO2P00403 227 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 IL7P13232 177 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 FOLR2P14207 255 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 PPP1R1AQ13522 171 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 TATDN3Q17R31 274 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 ANKRD55Q3KP44 614 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 CD300EQ496F6 205 aaPredicted RBP13.51□□□□□ -0.25
CLK4-211ENST00000522556 AARDQ4LEZ3 155 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms