RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 UNQ5815/PRO19632Q6UWF5 114 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 LURAP1LQ8IV03 231 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 HIST3H2BBQ8N257 126 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 ZCCHC14Q8WYQ9 949 aaKnown RBP11.59□□□□□ -0.55
SYNPO-205ENST00000522122 EAF1Q96JC9 268 aaPredicted RBP11.59□□□□□ -0.55
SYNPO-205ENST00000522122 RNF115Q9Y4L5 304 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 HLA-DRB1P01911 266 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 NBEAP1P0C6P0 100 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 MBD3L1Q8WWY6 194 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 DEPPQ9NTK1 212 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 WNK2Q9Y3S1 2297 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 TM4SF5O14894 197 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 CTAG1AP78358 180 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
SYNPO-205ENST00000522122 LOC102724200A0A096LPH7 203 aaPredicted RBP11.58□□□□□ -0.55
SYNPO-205ENST00000522122 IGHV1-69-2A0A0G2JMI3 117 aa11.58□□□□□ -0.55
SYNPO-205ENST00000522122 ZNF207O43670 478 aaKnown RBP11.58□□□□□ -0.55
SYNPO-205ENST00000522122 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.55
SYNPO-205ENST00000522122 METTL26Q96S19 204 aa11.58□□□□□ -0.55
SYNPO-205ENST00000522122 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 RNF224P0DH78 156 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
SYNPO-205ENST00000522122 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 OR10AG1Q8NH19 301 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 FGFBP3Q8TAT2 258 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 C16orf92Q96LL3 132 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 OTX1P32242 354 aaPredicted RBP11.58□□□□□ -0.56
SYNPO-205ENST00000522122 FAM27E3Q08E93 113 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 TMEM42Q69YG0 159 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 ZNF324BQ6AW86 544 aaPredicted RBP11.58□□□□□ -0.56
SYNPO-205ENST00000522122 ATOH7Q8N100 152 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 NBASA2RRP1 2371 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 ID1P41134 155 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 HBBP68871 147 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 ASCL4Q6XD76 172 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 IMMP2LQ96T52 175 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 DOPEY2Q9Y3R5 2298 aa11.58□□□□□ -0.56
SYNPO-205ENST00000522122 ZNF497Q6ZNH5 498 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 FAM90A1Q86YD7 464 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 ABCA1O95477 2261 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 GAGE10A6NGK3 116 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 LIPFP07098 398 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 PSG9Q00887 426 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 NMSQ5H8A3 153 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 PHF3Q92576 2039 aaKnown RBP11.57□□□□□ -0.56
SYNPO-205ENST00000522122 CD55P08174 381 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 E9PLN8 166 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
SYNPO-205ENST00000522122 ZFP36L1Q07352 338 aaKnown RBP11.57□□□□□ -0.56
SYNPO-205ENST00000522122 DNLZQ5SXM8 178 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 TCF24Q7RTU0 167 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 TMEM170AQ8WVE7 144 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 MAP1LC3AQ9H492 121 aa11.57□□□□□ -0.56
SYNPO-205ENST00000522122 KIAA2026Q5HYC2 2103 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 IL4P05112 153 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 Q6ZS49 121 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 PNKDQ8N490 385 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 OR10J6PQ8NGY7 276 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 CGB1A6NKQ9 187 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 ACSF3Q4G176 576 aaPredicted RBP11.56□□□□□ -0.56
SYNPO-205ENST00000522122 C2orf83Q53S99 150 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 TRBV24-1A0A075B6N3 115 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 TMEM144Q7Z5S9 345 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 TMEM106BQ9NUM4 274 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 B9A039 149 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 NPIPB11E5RHQ5 1161 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 YPEL1O60688 119 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 YPEL2Q96QA6 119 aa11.56□□□□□ -0.56
SYNPO-205ENST00000522122 A0A1W2PS18 150 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 FBLL1A6NHQ2 334 aaKnown RBP11.55□□□□□ -0.56
SYNPO-205ENST00000522122 ZNF502Q8TBZ5 544 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 ELOVL5Q9NYP7 299 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 FANCMQ8IYD8 2048 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 ANOS1P23352 680 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 IL15RAQ13261 267 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 TBR1Q16650 682 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 C21orf62-AS1Q17RA5 79 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 MIR17HGQ75NE6 70 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 TICRRQ7Z2Z1 1910 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 EP400Q96L91 3159 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 PEX7O00628 323 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 RAMP3O60896 148 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 PF4V1P10720 104 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
SYNPO-205ENST00000522122 STAG3L2P0CL84 134 aa11.55□□□□□ -0.56
SYNPO-205ENST00000522122 GATA2P23769 480 aaPredicted RBP11.55□□□□□ -0.56
SYNPO-205ENST00000522122 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
SYNPO-205ENST00000522122 IGKV3D-15A0A087WSY6 115 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 C1QTNF9BB2RNN3 333 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 RAB9AP51151 201 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 MEF2CQ06413 473 aaPredicted RBP11.54□□□□□ -0.56
SYNPO-205ENST00000522122 HERPUD1Q15011 391 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 C9orf106Q8NAJ2 232 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms