RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 PARP11Q9NR21 331 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 NDUFA4L2Q9NRX3 87 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 COA4Q9NYJ1 87 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 LINC00527Q9UJ94 153 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 FOXA2Q9Y261 457 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-210ENST00000521932 ZNF257Q9Y2Q1 563 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 NSG2Q9Y328 171 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 TMED3Q9Y3Q3 217 aa6.53□□□□□ -1.36
VPS13B-210ENST00000521932 TRAV41A0A0B4J266 112 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 A0A1B0GU03 582 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 PSMB11A5LHX3 300 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 TEX22C9J3V5 150 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 INMT-MINDY4F8WBC2 141 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 PRAF2O60831 178 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 ELANEP08246 267 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 TRAPPC2P0DI81 140 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 TRAPPC2BP0DI82 140 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 PSMB8P28062 276 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
VPS13B-210ENST00000521932 HSPE1P61604 102 aaKnown RBP6.52□□□□□ -1.37
VPS13B-210ENST00000521932 IZUMO4Q1ZYL8 232 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 KLK9Q2XQG4 91 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 C10orf55Q5SWW7 151 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 TEX38Q6PEX7 206 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 C10orf99Q6UWK7 81 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 C12orf54Q6X4T0 127 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-210ENST00000521932 ZNF329Q86UD4 541 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 TTC9CQ8N5M4 171 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 OR52B4Q8NGK2 314 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 OR5M8Q8NGP6 311 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 OR1L8Q8NGR8 309 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 SPATA3Q8NHX4 192 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 GRPEL2Q8TAA5 225 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 ZNF431Q8TF32 576 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-210ENST00000521932 CASTOR1Q8WTX7 329 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 PHB2Q99623 299 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 CITED1Q99966 193 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 QTRT1Q9BXR0 403 aaKnown RBP6.52□□□□□ -1.37
VPS13B-210ENST00000521932 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-210ENST00000521932 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 KLK9Q9UKQ9 250 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 OR51B2Q9Y5P1 312 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 WSB1Q9Y6I7 421 aa6.52□□□□□ -1.37
VPS13B-210ENST00000521932 NPIPB5A8MRT5 1133 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 SNRPGP15A8MWD9 76 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 H3BUA1 57 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 PLXNB1O43157 2135 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 SOX15O60248 233 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 PITX3O75364 302 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 DHFRP00374 187 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 OPN1MWP04001 364 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 CRYGCP07315 174 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 OPN1MW2P0DN77 364 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 OPN1MW3P0DN78 364 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 MYOD1P15172 320 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 SPNP16150 400 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 FOXE3Q13461 319 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 OXA1LQ15070 435 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 RGS21Q2M5E4 152 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 TCTEX1D4Q5JR98 221 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 UNQ5815/PRO19632Q6UWF5 114 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 SEC22CQ9BRL7 303 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 GPN1Q9HCN4 374 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-210ENST00000521932 TNCP24821 2201 aa6.51□□□□□ -1.37
VPS13B-210ENST00000521932 A0A1W2PN81 502 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 IGLC7A0M8Q6 106 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 HMX3A6NHT5 357 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 ST8SIA3O43173 380 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 RBMXL2O75526 392 aaKnown RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 ADAP1O75689 374 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 IFNA21P01568 189 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 HOXB5P09067 269 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 SULT1A3P0DMM9 295 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 SULT1A4P0DMN0 295 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 CD28P10747 220 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 CTRB1P17538 263 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 CHRNA7P36544 502 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 RAB9AP51151 201 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 PRCDQ00LT1 54 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 SRSF4Q08170 494 aaKnown RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 KIAA0141Q14154 515 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 SMCO1Q147U7 214 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 ECSCRQ19T08 205 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 GGNBP1Q5YKI7 109 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 CTRB2Q6GPI1 263 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 C12orf45Q8N5I9 185 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 C3orf56Q8N813 242 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 OR10W1Q8NGF6 305 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 OR4X2Q8NGF9 303 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 FAM110DQ8TAY7 271 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 MYOZ3Q8TDC0 251 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 ABHD5Q8WTS1 349 aa6.5□□□□□ -1.37
VPS13B-210ENST00000521932 FYTTD1Q96QD9 318 aaKnown RBP6.5□□□□□ -1.37
VPS13B-210ENST00000521932 SLA2Q9H6Q3 261 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms