RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR2C1O95371 312 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 IGLV1-51P01701 117 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 CSN3P07498 182 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 ARL3P36405 182 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 AP3S2P59780 193 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 HSPE1P61604 102 aaKnown RBP15.74■□□□□ 0.11
TRIM35-203ENST00000521253 PRCDQ00LT1 54 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 SPANXN2Q5MJ10 180 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 SLC25A24Q6NUK1 477 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 TOMM5Q8N4H5 51 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 GLYATL2Q8WU03 294 aa15.74■□□□□ 0.11
TRIM35-203ENST00000521253 LSM4Q9Y4Z0 139 aaKnown RBP15.74■□□□□ 0.11
TRIM35-203ENST00000521253 CDS2O95674 445 aa15.73■□□□□ 0.11
TRIM35-203ENST00000521253 CLEC3BP05452 202 aa15.73■□□□□ 0.11
TRIM35-203ENST00000521253 FAUP35544 74 aaKnown RBP15.73■□□□□ 0.11
TRIM35-203ENST00000521253 LHFPL5Q8TAF8 219 aa15.73■□□□□ 0.11
TRIM35-203ENST00000521253 ZNF502Q8TBZ5 544 aa15.73■□□□□ 0.11
TRIM35-203ENST00000521253 TMEM230Q96A57 120 aa15.73■□□□□ 0.11
TRIM35-203ENST00000521253 NDUFA13Q9P0J0 144 aa15.73■□□□□ 0.11
TRIM35-203ENST00000521253 SORL1Q92673 2214 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 A0A0G2JRQ6 117 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 DCTN2Q13561 401 aaKnown RBP15.72■□□□□ 0.11
TRIM35-203ENST00000521253 OR2C3Q8N628 320 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 VN1R17PQ8TDU5 208 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 RRNAD1Q96FB5 475 aaKnown RBP15.72■□□□□ 0.11
TRIM35-203ENST00000521253 SCGB3A2Q96PL1 93 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 SRRQ9GZT4 340 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 PEMTQ9UBM1 199 aa15.72■□□□□ 0.11
TRIM35-203ENST00000521253 GP9P14770 177 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 GPR183P32249 361 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 DHODHQ02127 395 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 SPINK9Q5DT21 86 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 GPHB5Q86YW7 130 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 OR1L6Q8NGR2 347 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 OR1P1Q8NH06 330 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 RNASE11Q8TAA1 199 aaKnown RBP15.71■□□□□ 0.11
TRIM35-203ENST00000521253 PLEKHA3Q9HB20 300 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 ZC4H2Q9NQZ6 224 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 SIGLEC8Q9NYZ4 499 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 COL7A1Q02388 2944 aa15.71■□□□□ 0.11
TRIM35-203ENST00000521253 IGHV3-21A0A0B4J1V1 117 aa15.7■□□□□ 0.1
TRIM35-203ENST00000521253 ST8SIA3O43173 380 aa15.7■□□□□ 0.1
TRIM35-203ENST00000521253 Q6ZRM9 215 aa15.7■□□□□ 0.1
TRIM35-203ENST00000521253 SGPP2Q8IWX5 399 aa15.7■□□□□ 0.1
TRIM35-203ENST00000521253 SELENOHQ8IZQ5 122 aaKnown RBP15.7■□□□□ 0.1
TRIM35-203ENST00000521253 RBPMSQ93062 196 aaKnown RBP15.7■□□□□ 0.1
TRIM35-203ENST00000521253 K7EIM0 57 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 LGALS9O00182 355 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 TMEM268Q5VZI3 342 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 ADAMTSL5Q6ZMM2 481 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 FAM219AQ8IW50 185 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 ZNF114Q8NC26 417 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 SCARB1Q8WTV0 552 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 DEDD2Q8WXF8 326 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 GALNT14Q96FL9 552 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 B9D2Q9BPU9 175 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 TMEM56-RWDD3S4R434 201 aa15.69■□□□□ 0.1
TRIM35-203ENST00000521253 IFNA17P01571 189 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 AKR1C4P17516 323 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 ERHP84090 104 aaKnown RBP15.68■□□□□ 0.1
TRIM35-203ENST00000521253 TMEM187Q14656 261 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 SLC35G3Q8N808 338 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 PDCD10Q9BUL8 212 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 C21orf62Q9NYP8 219 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 PRR13Q9NZ81 148 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 KCNIP3Q9Y2W7 256 aa15.68■□□□□ 0.1
TRIM35-203ENST00000521253 OR2T8A6NH00 312 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 C2orf70A6NJV1 201 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 TGOLN2O43493 480 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 EDN2P20800 178 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 SUPT4H1P63272 117 aaKnown RBP15.67■□□□□ 0.1
TRIM35-203ENST00000521253 CD69Q07108 199 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 BAK1Q16611 211 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 FAM106AQ4KMX7 169 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 ZNF57Q68EA5 555 aaPredicted RBP15.67■□□□□ 0.1
TRIM35-203ENST00000521253 PLET1Q6UQ28 207 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 GPR146Q96CH1 333 aa15.67■□□□□ 0.1
TRIM35-203ENST00000521253 IGHV3-35A0A0C4DH35 117 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 ZNF320A2RRD8 509 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 F8W735 103 aaPredicted RBP15.66■□□□□ 0.1
TRIM35-203ENST00000521253 INS-IGF2F8WCM5 200 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 AARDQ4LEZ3 155 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 TMED4Q7Z7H5 227 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 IL22RA2Q969J5 263 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 MISP3Q96FF7 219 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 SMAD5-AS1Q9Y6J3 95 aa15.66■□□□□ 0.1
TRIM35-203ENST00000521253 I3L2K1 104 aa15.65■□□□□ 0.1
TRIM35-203ENST00000521253 FOLR2P14207 255 aa15.65■□□□□ 0.1
TRIM35-203ENST00000521253 TRIQKQ629K1 86 aa15.65■□□□□ 0.1
TRIM35-203ENST00000521253 UNQ9165/PRO28630Q6UXU0 137 aa15.65■□□□□ 0.1
TRIM35-203ENST00000521253 BSCL2Q96G97 398 aaPredicted RBP15.65■□□□□ 0.1
TRIM35-203ENST00000521253 ATP6V0BQ99437 205 aa15.65■□□□□ 0.1
TRIM35-203ENST00000521253 SDHCQ99643 169 aaPredicted RBP15.65■□□□□ 0.1
TRIM35-203ENST00000521253 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.65■□□□□ 0.1
TRIM35-203ENST00000521253 CACNG5Q9UF02 275 aa15.65■□□□□ 0.1
TRIM35-203ENST00000521253 TMEM213A2RRL7 107 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 IZUMO1RA6ND01 250 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 A8MWP6 167 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 SNCAP37840 140 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 HOXA1P49639 335 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms