RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GABRPO00591 440 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 FFAR1O14842 300 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 RS1O15537 224 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 SULT1B1O43704 296 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 GSTZ1O43708 216 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 SC5DO75845 299 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 GATBO75879 557 aaKnown RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ARL6IP5O75915 188 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CNIH1O95406 144 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 TMEM50AO95807 157 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 LALBAP00709 142 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 SNRPCP09234 159 aaKnown RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 LGALS1P09382 135 aaKnown RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 LIMS3P0CW19 117 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 LIMS4P0CW20 117 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CGB3P0DN86 165 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CGB7P0DN87 165 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 PRB4P10163 310 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 HTR1FP30939 366 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 KIR2DS2P43631 304 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 GABRA2P47869 451 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 OR1E2P47887 323 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ERVK11-1P61568 191 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 RAB11AP62491 216 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 NDPQ00604 133 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ST3GAL3Q11203 375 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 TRAM2Q15035 370 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 RAB11BQ15907 218 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 HLA-DRB5Q30154 266 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 TIGITQ495A1 244 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 SMUG1Q53HV7 270 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 Q5BKY6 102 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 MUC21Q5SSG8 566 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF57Q68EA5 555 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 LAMTOR1Q6IAA8 161 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 C22orf42Q6IC83 251 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 UQCC3Q6UW78 93 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ACBD7Q8N6N7 88 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CYB561A3Q8NBI2 242 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF485Q8NCK3 441 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF680Q8NEM1 530 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 OR10V1Q8NGI7 309 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 OR1L6Q8NGR2 347 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF431Q8TF32 576 aaPredicted RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CASTOR1Q8WTX7 329 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 MITD1Q8WV92 249 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 Q96M85 177 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CABLES2Q9BTV7 478 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CLEC7AQ9BXN2 247 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CACYBPQ9HB71 228 aaKnown RBP2.71□□□□□ -1.98
VPS13B-208ENST00000521037 ZC4H2Q9NQZ6 224 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 BABAM2Q9NXR7 383 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 TVP23BQ9NYZ1 205 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 EHFQ9NZC4 300 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 DNAJC27Q9NZQ0 273 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 COMMD3Q9UBI1 195 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 CLEC2DQ9UHP7 191 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 BAIAP2Q9UQB8 552 aa2.71□□□□□ -1.98
VPS13B-208ENST00000521037 AGRNO00468 2067 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 PRSS37A4D1T9 235 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 CPSF4LA6NMK7 179 aaKnown RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 HMSDA8MTL9 139 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SNRPGP15A8MWD9 76 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 OR11H12B2RN74 326 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF736B4DX44 427 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 F5H5K5 113 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 PDCD5O14737 125 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 FABP7O15540 132 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 HPGDSO60760 199 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SMR3BP02814 79 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 IL5P05113 134 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 GIPP09681 153 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SULT1A3P0DMM9 295 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SULT1A4P0DMN0 295 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SLC2A1P11166 492 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SRMP19623 302 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 CELP19835 753 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 ZP3P21754 424 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 BRS3P32247 399 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 FUSP35637 526 aaKnown RBP eCLIP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 NAA10P41227 235 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 CRIP2P52943 208 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 MFAP2P55001 183 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 TAS2R41P59536 307 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 RPS25P62851 125 aaKnown RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 FABP5Q01469 135 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 MXD1Q05195 221 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 GPR176Q14439 515 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 IZUMO4Q1ZYL8 232 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SPSB3Q6PJ21 355 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF322Q6U7Q0 402 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 MRPL21Q7Z2W9 205 aaKnown RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 SPATA12Q7Z6I5 190 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 OR6V1Q8N148 313 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 ABHD12Q8N2K0 398 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 TOMM5Q8N4H5 51 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF561Q8N587 486 aa2.7□□□□□ -1.98
VPS13B-208ENST00000521037 EIF4E3Q8N5X7 224 aaKnown RBP2.7□□□□□ -1.98
VPS13B-208ENST00000521037 TPRX1Q8N7U7 411 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms