RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 FTH1P19P0C7X4 201 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 GPR12P47775 334 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 RPL30P62888 115 aaKnown RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 RPL8P62917 257 aaKnown RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 TM4SF20Q53R12 229 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 SSX8Q7RTT4 187 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 TMEM116Q8NCL8 245 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 GMPPAQ96IJ6 420 aaPredicted RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 AGMATQ9BSE5 352 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 WDR54Q9H977 334 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 A0A1W2PS18 150 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 OR11H12B2RN74 326 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF585BQ52M93 769 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 WIPI1Q5MNZ9 446 aaPredicted RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 OR11H1Q8NG94 326 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 OR11H2Q8NH07 326 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 PRRG4Q9BZD6 226 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 PKIBQ9C010 78 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 MRPL27Q9P0M9 148 aaKnown RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 YTHDF2Q9Y5A9 579 aaKnown RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 HILPDAQ9Y5L2 63 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 SPTBN2O15020 2390 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 SCRG1O75711 98 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 CA2P00918 260 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 CYB561P49447 251 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 LCN2P80188 198 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 CFHR1Q03591 330 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 ABHD17BQ5VST6 288 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 C1orf162Q8NEQ5 155 aaPredicted RBP8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 LINC00479Q96M42 142 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 DCTN5Q9BTE1 182 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 SH2D2AQ9NP31 389 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 GPR179Q6PRD1 2367 aa8.44□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF138P52744 262 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 MFAP2P55001 183 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 NINJ1Q92982 152 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 GALMQ96C23 342 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 K7EN84 100 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 YPEL1O60688 119 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 PSG5Q15238 335 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 TNXAQ16473 311 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 BVES-AS1Q5T3Y7 98 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 DEFB125Q8N687 156 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 OR10AG1Q8NH19 301 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 YPEL2Q96QA6 119 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 OR2H1Q9GZK4 316 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF331Q9NQX6 463 aaPredicted RBP8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 ZDBF2Q9HCK1 2354 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 C17orf112F2Z3M2 114 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 IGLL1P15814 213 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 GNG4P50150 75 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 C3AR1Q16581 482 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 CENPWQ5EE01 88 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 TCTEX1D4Q5JR98 221 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 PCSK4Q6UW60 755 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 FER1L6-AS2Q96M78 137 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 FGF23Q9GZV9 251 aaPredicted RBP8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 FZR1Q9UM11 496 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 PLXNB1O43157 2135 aa8.43□□□□□ -1.06
PDGFRB-207ENST00000520579 H3BTX0 84 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 MYOD1P15172 320 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 GNG3P63215 75 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 DLL3Q9NYJ7 618 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 SYNGR3O43761 229 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 ENSAO43768 121 aaKnown RBP8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 DUX1O43812 170 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 FCGR3BO75015 233 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 PLAUP00749 431 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 CTRLP40313 264 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF324BQ6AW86 544 aaPredicted RBP8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF826PQ6ZT77 177 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 LINC00173Q6ZV60 143 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 LIN7CQ9NUP9 197 aaKnown RBP8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 TNFRSF4P43489 277 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF441Q8N8Z8 693 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 IL36BQ9NZH7 164 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 JPT1Q9UK76 154 aa8.42□□□□□ -1.06
PDGFRB-207ENST00000520579 TRAV24A0A0B4J272 114 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 CD5LO43866 347 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 ZNF355PQ9NSJ1 428 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 MED13LQ71F56 2210 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 TRAV9-2A0A087WT02 112 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 APCSP02743 223 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 TYMSP04818 313 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 FAM27BQ5VT28 67 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 PLXDC1Q8IUK5 500 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 ZIC4Q8N9L1 334 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 CT55Q8WUE5 264 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 EAF1Q96JC9 268 aaPredicted RBP8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 HSD17B10Q99714 261 aaKnown RBP8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 NDFIP1Q9BT67 221 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 ENY2Q9NPA8 101 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 IGHV1OR21-1A0A087WYE8 117 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 MOB3BQ86TA1 216 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms