RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KIF13BQ9NQT8 1826 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 A0A1B0GV72 72 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TMEM269A0A1B0GVZ9 245 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TRAPPC13A5PLN9 417 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 PPP5D1E7EU14 171 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 H0YJX3 145 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 H3BQV1 296 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 KALRNO60229 2985 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 PRM2P04554 102 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 UCHL1P09936 223 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BOP23527 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 ERP29P30040 261 aaKnown RBP2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BBP33778 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TCTAP57738 103 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BDP58876 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TAS2R41P59536 307 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BCP62807 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TFAMQ00059 246 aaKnown RBP2.13□□□□□ -2.07
SQLE-204ENST00000520493 TSNQ15631 228 aaKnown RBP2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST2H2BEQ16778 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.13□□□□□ -2.07
SQLE-204ENST00000520493 C3orf33Q6P1S2 294 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TMPPEQ6ZT21 453 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 ZNF675Q8TD23 568 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BHQ93079 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 ZHX1-C8orf76Q96EF9 292 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 C2orf50Q96LR7 162 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 IGF2BP2-AS1Q96M15 143 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BNQ99877 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H2BMQ99879 126 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 TM2D3Q9BRN9 247 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 DDA1Q9BW61 102 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 C11orf68Q9H3H3 251 aaKnown RBP2.13□□□□□ -2.07
SQLE-204ENST00000520493 RNF122Q9H9V4 155 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 MRPL40Q9NQ50 206 aaKnown RBP2.13□□□□□ -2.07
SQLE-204ENST00000520493 IL36BQ9NZH7 164 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 CFAP47Q6ZTR5 3102 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 SHANK3Q9BYB0 1731 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 ZNF407Q9C0G0 2248 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 ANKRD30AQ9BXX3 1397 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 VCANP13611 3396 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 A0A0J9YW62 118 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 TXNDC9O14530 226 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 LEPROTO15243 131 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 S1PR2O95136 353 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 IGKV1-5P01602 117 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 RNASE2P10153 161 aaKnown RBP2.12□□□□□ -2.07
SQLE-204ENST00000520493 SPI1P17947 270 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 ALDH3A1P30838 453 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 DEFB134Q4QY38 66 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 Q6Q795 121 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 OR10D4PQ8NGN7 298 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 SH3BGRL3Q9H299 93 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 TVP23BQ9NYZ1 205 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 UTP11Q9Y3A2 253 aaKnown RBP2.12□□□□□ -2.07
SQLE-204ENST00000520493 UFC1Q9Y3C8 167 aa2.12□□□□□ -2.07
SQLE-204ENST00000520493 CACNA1DQ01668 2161 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 TRBV19A0A075B6N1 114 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 A0A1W2PQD3 144 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 IRGMA1A4Y4 181 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 J3QRK9 145 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 CCL5P13501 91 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 CBR1P16152 277 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 GZMHP20718 246 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 SERPINB1P30740 379 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 CA5AP35218 305 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 G6PCP35575 357 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 DEFA1P59665 94 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 RPL18Q07020 188 aaKnown RBP2.11□□□□□ -2.07
SQLE-204ENST00000520493 MOGQ16653 247 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 AKR1C8PQ5T2L2 129 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 AADACL3Q5VUY0 350 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 TCF24Q7RTU0 167 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 GRINAQ7Z429 371 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 TAC4Q86UU9 113 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 SMIM20Q8N5G0 67 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 H1FXQ92522 213 aaKnown RBP2.11□□□□□ -2.07
SQLE-204ENST00000520493 PKMYT1Q99640 499 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 DERL1Q9BUN8 251 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 ZNF471Q9BX82 626 aaPredicted RBP2.11□□□□□ -2.07
SQLE-204ENST00000520493 TTTY13Q9BZ97 58 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 LYRM2Q9NU23 88 aaPredicted RBP2.11□□□□□ -2.07
SQLE-204ENST00000520493 MRPL16Q9NX20 251 aaKnown RBP2.11□□□□□ -2.07
SQLE-204ENST00000520493 PRNDQ9UKY0 176 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 HSPE1-MOB4S4R3N1 261 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 NAV3Q8IVL0 2385 aa2.11□□□□□ -2.07
SQLE-204ENST00000520493 MAST2Q6P0Q8 1798 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 HELZ2Q9BYK8 2649 aaKnown RBP2.1□□□□□ -2.07
SQLE-204ENST00000520493 TRPM6Q9BX84 2022 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 MIA2Q96PC5 1412 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 YTHDC2Q9H6S0 1430 aaKnown RBP2.1□□□□□ -2.07
SQLE-204ENST00000520493 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 WDFY4Q6ZS81 3184 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 IGKV1D-17A0A075B6S4 117 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 IGKV1D-43A0A0B4J1Z2 117 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 TRAV38-1A0A0B4J264 116 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 TRAV4A0A0B4J268 109 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 A0A1W2PNM2 257 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 GNG14A0A1W2PPG7 69 aa2.1□□□□□ -2.07
SQLE-204ENST00000520493 G3V2T6 193 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms