RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 C19orf24Q9BVV8 132 aa13.93□□□□□ -0.18
SDC2-205ENST00000520233 NIPBLQ6KC79 2804 aaeCLIP13.92□□□□□ -0.18
SDC2-205ENST00000520233 A0A1B0GVG6 124 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 K7EPK0 472 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 IAPPP10997 89 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 SNCAP37840 140 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 KLK9Q2XQG4 91 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 BSXQ3C1V8 233 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 TEX38Q6PEX7 206 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 C10orf99Q6UWK7 81 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 OR5AU1Q8NGC0 362 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 OR1L6Q8NGR2 347 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 CHAC2Q8WUX2 184 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 PPP1R1CQ8WVI7 109 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 RAB40CQ96S21 281 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 KLK9Q9UKQ9 250 aa13.92□□□□□ -0.18
SDC2-205ENST00000520233 RCL1Q9Y2P8 373 aaKnown RBP13.92□□□□□ -0.18
SDC2-205ENST00000520233 LSM5Q9Y4Y9 91 aaKnown RBP13.92□□□□□ -0.18
SDC2-205ENST00000520233 F11RQ9Y624 299 aaKnown RBP13.92□□□□□ -0.18
SDC2-205ENST00000520233 HAX1O00165 279 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 SSSCA1O60232 199 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 ELANEP08246 267 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 DEFA4P12838 97 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 HTR2BP41595 481 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 SUB1P53999 127 aaKnown RBP eCLIP13.91□□□□□ -0.18
SDC2-205ENST00000520233 TAS2R30P59541 319 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 S100A10P60903 97 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 FOXE3Q13461 319 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 KRTAP21-3Q3LHN1 58 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 AWAT1Q58HT5 328 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 C11orf87Q6NUJ2 197 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 C19orf35Q6ZS72 473 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 SMIM8Q96KF7 97 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 P2RX4Q99571 388 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 U3KQ87 197 aa13.91□□□□□ -0.18
SDC2-205ENST00000520233 CYB5BO43169 146 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 RLN2P04090 185 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 RNASE2P10153 161 aaKnown RBP13.9□□□□□ -0.18
SDC2-205ENST00000520233 HIST1H1BP16401 226 aaKnown RBP13.9□□□□□ -0.18
SDC2-205ENST00000520233 PSMB8P28062 276 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 BCAP31P51572 246 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.18
SDC2-205ENST00000520233 RAP2BP61225 183 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 LRRC37A5PQ49AS3 106 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 C2orf83Q53S99 150 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 SLC24A4Q8NFF2 622 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 C11orf1Q9H5F2 150 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 SLA2Q9H6Q3 261 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 ZNF355PQ9NSJ1 428 aa13.9□□□□□ -0.18
SDC2-205ENST00000520233 TRBV9A0A0B4J1U6 114 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 L7N2F9 121 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 DEDDO75618 318 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 MPC2O95563 127 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 IFNA10P01566 189 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 PRH1P02810 166 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 PF4V1P10720 104 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 PVALBP20472 110 aaPredicted RBP13.89□□□□□ -0.19
SDC2-205ENST00000520233 MFAP2P55001 183 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 PAX9P55771 341 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 VAMP2P63027 116 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 RPP30P78346 268 aaKnown RBP13.89□□□□□ -0.19
SDC2-205ENST00000520233 PVRIGQ6DKI7 326 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 TMEM65Q6PI78 240 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 NOXA1Q86UR1 476 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 RNF152Q8N8N0 203 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 OR4X2Q8NGF9 303 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 FANCD2OSQ96PS1 177 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 PSENENQ9NZ42 101 aa13.89□□□□□ -0.19
SDC2-205ENST00000520233 IGLV11-55A0A075B6I3 123 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 TMEM50AO95807 157 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 PET100P0DJ07 73 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 NPY1RP25929 384 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 RAB9AP51151 201 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 RPL23AP62750 156 aaKnown RBP13.88□□□□□ -0.19
SDC2-205ENST00000520233 CD83Q01151 205 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 SLC25A24Q6NUK1 477 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 MS4A10Q96PG2 267 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 KLK15Q9H2R5 256 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 DMRT1Q9Y5R6 373 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 NF1P21359 2839 aa13.88□□□□□ -0.19
SDC2-205ENST00000520233 H0YIZ8 118 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 TSC22D2O75157 780 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 TRGV3P03979 118 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 TPPP2P59282 170 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 FGL1Q08830 312 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 SPANXN5Q5MJ07 72 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 TMEM170AQ8WVE7 144 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 WFDC12Q8WWY7 111 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 RNF126Q9BV68 326 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 THYN1Q9P016 225 aa13.87□□□□□ -0.19
SDC2-205ENST00000520233 STRAPQ9Y3F4 350 aaKnown RBP13.87□□□□□ -0.19
SDC2-205ENST00000520233 FAM223BA6NKX1 122 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 C15orf62A8K5M9 175 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 E5RGE8 158 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 CORTO00230 105 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 OR2J3O76001 311 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 RPLP1P05386 114 aaKnown RBP13.86□□□□□ -0.19
SDC2-205ENST00000520233 KRTAP10-3P60369 221 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms