RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 TRIM16LQ309B1 348 aa10.68□□□□□ -0.7
PDGFRB-202ENST00000517488 OR51S1Q8NGJ8 323 aa10.68□□□□□ -0.7
PDGFRB-202ENST00000517488 VN1R17PQ8TDU5 208 aa10.68□□□□□ -0.7
PDGFRB-202ENST00000517488 TMEM56Q96MV1 263 aa10.68□□□□□ -0.7
PDGFRB-202ENST00000517488 THAP7Q9BT49 309 aaPredicted RBP10.68□□□□□ -0.7
PDGFRB-202ENST00000517488 C5orf66Q9H5L9 145 aa10.68□□□□□ -0.7
PDGFRB-202ENST00000517488 IGHV3-35A0A0C4DH35 117 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 ZNF320A2RRD8 509 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 K7EIM0 57 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 CYB5BO43169 146 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 FRMD6-AS1P0C7T7 363 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 FOLR2P14207 255 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 UCP1P25874 307 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 CD300EQ496F6 205 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 FAM106AQ4KMX7 169 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 SPINK9Q5DT21 86 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 Q8N402 240 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 CACNG8Q8WXS5 425 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 GPR132Q9UNW8 380 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 C14orf166Q9Y224 244 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 SELENOKQ9Y6D0 94 aa10.67□□□□□ -0.7
PDGFRB-202ENST00000517488 A0A0G2JRQ6 117 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 OR5AC1P0C628 307 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 AKR1C2P52895 323 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 SURF2Q15527 256 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 PLET1Q6UQ28 207 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 OR1P1Q8NH06 330 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 SCARB1Q8WTV0 552 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 PRRT1Q99946 306 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 SLC2A8Q9NY64 477 aa10.66□□□□□ -0.7
PDGFRB-202ENST00000517488 TEX13DA0A0J9YY54 714 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 OR2T8A6NH00 312 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 F8W735 103 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 ST8SIA3O43173 380 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 TGOLN2O43493 480 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 ATG12O94817 140 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 IGHV4-30-4P0DP06 118 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 CBLN1P23435 193 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 TM4SF20Q53R12 229 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 PYDC2Q56P42 97 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 Q6ZRM9 215 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 OR1L6Q8NGR2 347 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 LHFPL5Q8TAF8 219 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 DYNLRB2Q8TF09 96 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 GLYATL2Q8WU03 294 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 TMEM222Q9H0R3 208 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 PLEKHA3Q9HB20 300 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 MCUBQ9NWR8 336 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 C21orf62Q9NYP8 219 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 V9GYH0 126 aa10.65□□□□□ -0.7
PDGFRB-202ENST00000517488 DNAH7Q8WXX0 4024 aa10.65□□□□□ -0.71
PDGFRB-202ENST00000517488 CRYM-AS1A6NIL9 109 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF785A8K8V0 405 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 A8MWP6 167 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 B3GALNT1O75752 331 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 CDS2O95674 445 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 KLF9Q13886 244 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 UXS1Q8NBZ7 420 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 TRIM63Q969Q1 353 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 RRNAD1Q96FB5 475 aaKnown RBP10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 MISP3Q96FF7 219 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 CHRDL1Q9BU40 450 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF436Q9C0F3 470 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 U3KQK5 164 aa10.64□□□□□ -0.71
PDGFRB-202ENST00000517488 I3L2K1 104 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF701M0R085 212 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 IFNA17P01571 189 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 ADMP35318 185 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 ETV6P41212 452 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 ERHP84090 104 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF79Q15937 498 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 CCDC190Q86UF4 302 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 SGPP2Q8IWX5 399 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 SELENOHQ8IZQ5 122 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 UBAC2Q8NBM4 344 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF114Q8NC26 417 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 RNASE11Q8TAA1 199 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 TMEM230Q96A57 120 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 BSCL2Q96G97 398 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 TECRQ9NZ01 308 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 MLXQ9UH92 298 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 SCP2D1Q9UJQ7 156 aa10.63□□□□□ -0.71
PDGFRB-202ENST00000517488 A8MZ25 164 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 MT-CO2P00403 227 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 IGHV3-48P01763 117 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 S100A5P33763 92 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 DHODHQ02127 395 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 GUCA2BQ16661 112 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 Q56UQ5 140 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms