RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C17orf98A8MV24 154 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 RSPO1Q2MKA7 263 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM42Q69YG0 159 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 GATAD1Q8WUU5 269 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 SNRNP40Q96DI7 357 aaKnown RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 SCNM1Q9BWG6 230 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 PRO3102Q9H379 93 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 IGHV3OR16-10A0A075B7F0 116 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 ARL14EPLP0DKL9 152 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 PF4V1P10720 104 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 SELENOTP62341 195 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 PRB3Q04118 309 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 SSC4DQ8WTU2 575 aa9.09□□□□□ -0.95
PCDHGA1-202ENST00000517417 A0A0C4DFX4 3053 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 J3QW42 95 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 NTN3O00634 580 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 LOXL3P58215 753 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 TEX50A0A1B0GTY4 177 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 CRYBB3P26998 211 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 FXYD3Q14802 87 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 UNQ5815/PRO19632Q6UWF5 114 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 ASCL4Q6XD76 172 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 RRHO14718 337 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 VENTXO95231 258 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 NAPSAO96009 420 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGLV3-1P01715 115 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 CD55P08174 381 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 FAM106CPP0CH98 169 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 BSPH1Q075Z2 132 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 RIGQ13278 110 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 NPCDR1Q9BY65 106 aa9.08□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGHV3OR16-13A0A075B7E8 117 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 IGHV3-74A0A0B4J1X5 117 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 C1QTNF9BB2RNN3 333 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 APCSP02743 223 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 CD59P13987 128 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 ABLIM2Q6H8Q1 611 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 Q6ZN92 141 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 ZNF430Q9H8G1 570 aaPredicted RBP9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 PCNX2A6NKB5 2137 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 TCTAP57738 103 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 PAFAH1B2P68402 229 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 HERPUD1Q15011 391 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 IBA57Q5T440 356 aaKnown RBP9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 PLPPR1Q8TBJ4 325 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 RALYQ9UKM9 306 aaKnown RBP9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 NRN1LQ496H8 165 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 TMEM106BQ9NUM4 274 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 S4R3C0 116 aa9.07□□□□□ -0.96
PCDHGA1-202ENST00000517417 TRAV24A0A0B4J272 114 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 IFNL4K9M1U5 179 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 GZMBP10144 247 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 LCN2P80188 198 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 ZNF664Q8N3J9 261 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 SFRP2Q96HF1 295 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 NABP2Q9BQ15 211 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 PRDM13Q9H4Q3 707 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 CA2P00918 260 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 ATP5G3P48201 142 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 HOXA4Q00056 320 aaPredicted RBP9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 LY6EQ16553 131 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 COX19Q49B96 90 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 TMEM116Q8NCL8 245 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 CLEC7AQ9BXN2 247 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 MRPL18Q9H0U6 180 aaKnown RBP9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 VPS13AQ96RL7 3174 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 LOC105371242A0A075B767 164 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 LOC389332A0A1B0GUA5 103 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 OR2T8A6NH00 312 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 ISLRO14498 428 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 C8orf88P0DMB2 117 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 ATP5J2P56134 94 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 Q1RN00 199 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 DNLZQ5SXM8 178 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 Q6ZRM9 215 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 BPIFA4PQ86YQ2 179 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 GBGT1Q8N5D6 347 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 HS3ST6Q96QI5 342 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 MYO18BQ8IUG5 2567 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 PCNX3Q9H6A9 2034 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 A8MWL6 223 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 MOSP00540 346 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 CBLN1P23435 193 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 DGAT2L7PQ6IED9 249 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 TMEM186Q96B77 213 aa9.06□□□□□ -0.96
PCDHGA1-202ENST00000517417 COL6A3P12111 3177 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 B9A039 149 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 DIRC3C9JPN6 131 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 LIPFP07098 398 aa9.05□□□□□ -0.96
PCDHGA1-202ENST00000517417 PAX9P55771 341 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms