RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SEC14L6B5MCN3 397 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 H3BN98 237 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 ZNF701M0R085 212 aaPredicted RBP-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 CPN2P22792 545 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 HERVK_113P63121 156 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 RHEBQ15382 184 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 RASSF6Q6ZTQ3 369 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 LRRC6Q86X45 466 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 OR51Q1Q8NH59 317 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 DDI1Q8WTU0 396 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 ANKRD7Q92527 254 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 ACY3Q96HD9 319 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 IFNKQ9P0W0 207 aa-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 ZMAT5Q9UDW3 170 aaKnown RBP-3.75□□□□□ -3.01
RNU6-539P-201ENST00000516665 TSC2P49815 1807 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 TRAV22A0A0B4J277 110 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 RNF103-CHMP3A0A140T963 221 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 GGT3PA6NGU5 568 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 MRASO14807 208 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 DNASE1L1P49184 302 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 TTPAP49638 278 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 ATP6V0D1P61421 351 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 PDK3Q15120 406 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 TNFAIP8L3Q5GJ75 292 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 SYPL2Q5VXT5 272 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 OR56B2PQ8NGI1 322 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 Q8TAT8 98 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 C12orf43Q96C57 262 aaKnown RBP-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 TP53RKQ96S44 253 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 MRPS26Q9BYN8 205 aaKnown RBP-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 OR51E2Q9H255 320 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 TMEM14BQ9NUH8 114 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 TMEM216Q9P0N5 145 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 THSD7AQ9UPZ6 1657 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 CDK13Q14004 1512 aaKnown RBP-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 MYH10P35580 1976 aa-3.76□□□□□ -3.01
RNU6-539P-201ENST00000516665 CHD2O14647 1828 aaKnown RBP-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 AFDNP55196 1824 aaKnown RBP-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 KDM6AO15550 1401 aaPredicted RBP-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 RIC1Q4ADV7 1423 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 HELZP42694 1942 aaKnown RBP-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 A0A0A6YYH2 397 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 A0A0D9SFI3 127 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 A6NJ64 397 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 A6NN06 94 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 M0R381 172 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 DHFRP00374 187 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 OR8G3PP0DMU2 310 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 PDE6GP18545 87 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 EIF2S2P20042 333 aaKnown RBP-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 MX1P20591 662 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 DYNLL1P63167 89 aaKnown RBP-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 FXYD3Q14802 87 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 SSX8Q7RTT4 187 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 EXOC8Q8IYI6 725 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 C5orf56Q8N8D9 126 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 SPXQ9BT56 116 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 TPPP3Q9BW30 176 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 TP53TG1Q9Y2A0 90 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 GPRASP1Q5JY77 1395 aa-3.77□□□□□ -3.01
RNU6-539P-201ENST00000516665 CTTNBP2Q8WZ74 1663 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 SULT1C4O75897 302 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 COX6A1P12074 109 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 CSN1S1P47710 185 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 BAXQ07812 192 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 ANGPT1Q15389 498 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 HIKESHIQ53FT3 197 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 Q5XG85 94 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 Q6ZS49 121 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 HDDC3Q8N4P3 179 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 ATPAF2Q8N5M1 289 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 LINC00301Q8NCQ3 95 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 OR2T4Q8NH00 348 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 TMEM254Q8TBM7 123 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 RAB2BQ8WUD1 216 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 OR8D1Q8WZ84 308 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 ZNF714Q96N38 554 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 OPALINQ96PE5 141 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 BBS2Q9BXC9 721 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 CLEC2DQ9UHP7 191 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 SSC5DA1L4H1 1573 aa-3.78□□□□□ -3.01
RNU6-539P-201ENST00000516665 GVQW2A0A096LPI5 108 aaPredicted RBP-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 NBDYA0A0U1RRE5 68 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 FAM240BA0A1B0GVZ2 78 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 F2Z2F3 143 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 PSMD12O00232 456 aaPredicted RBP-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 GUCA1CO95843 209 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 HLA-DQB2P05538 268 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 RPL18Q07020 188 aaKnown RBP-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 LRRC74AQ0VAA2 488 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 EBPQ15125 230 aaKnown RBP-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 C2orf82Q6UX34 121 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 SLC35D2Q76EJ3 337 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR5A1Q8NGJ0 315 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR6K2Q8NGY2 324 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR5K1Q8NHB7 308 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 TEX47Q8TBZ9 253 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 C8orf44Q96CB5 159 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 CYTH2Q99418 400 aa-3.79□□□□□ -3.02
RNU6-539P-201ENST00000516665 COL24A1Q17RW2 1714 aa-3.8□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms