RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 SGMS2Q8NHU3 365 aa12.06□□□□□ -0.48
TRIO-222ENST00000515144 NEUROG3Q9Y4Z2 214 aa12.06□□□□□ -0.48
TRIO-222ENST00000515144 TIMM23O14925 209 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 IGFBP2P18065 325 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 CLDND2Q8NHS1 167 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 C11orf68Q9H3H3 251 aaKnown RBP12.05□□□□□ -0.48
TRIO-222ENST00000515144 C21orf62Q9NYP8 219 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 LINC00312Q9Y6C7 94 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 KBTBD11O94819 623 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 A0A087WV48 116 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 ZNF415Q09FC8 603 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 TRBV5-7A0A0A0MS05 114 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
TRIO-222ENST00000515144 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 NABP2Q9BQ15 211 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 J3QKU1 62 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 NBR2O15453 112 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 RTN4RL2Q86UN3 420 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 VN1R17PQ8TDU5 208 aa12.05□□□□□ -0.48
TRIO-222ENST00000515144 OTX1P32242 354 aaPredicted RBP12.04□□□□□ -0.48
TRIO-222ENST00000515144 CA7P43166 264 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 GALNT14Q96FL9 552 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 TMEM133Q9H2Q1 129 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 MLNRO43193 412 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 PRSS2P07478 247 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 RHOGP84095 191 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 ZNF385CQ66K41 422 aaPredicted RBP12.04□□□□□ -0.48
TRIO-222ENST00000515144 KLHL30-AS1Q8NEE0 82 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 LYZL4Q96KX0 146 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 A8MWL6 223 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 TIMP3P35625 211 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 TMEM183BQ1AE95 376 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 Q5PR19 223 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 PAM16Q9Y3D7 125 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 ZFHX2Q9C0A1 2572 aaPredicted RBP12.04□□□□□ -0.48
TRIO-222ENST00000515144 ELOBQ15370 118 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 VPS25Q9BRG1 176 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 LOC390937A0A1W2PQ73 354 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
TRIO-222ENST00000515144 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 GPR179Q6PRD1 2367 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 H3BUX3 64 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 WNT2P09544 360 aa12.04□□□□□ -0.48
TRIO-222ENST00000515144 GEMIN7Q9H840 131 aaKnown RBP12.04□□□□□ -0.48
TRIO-222ENST00000515144 RBFOX2O43251 390 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■■■□ 19.6
TRIO-222ENST00000515144 C8orf88P0DMB2 117 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 SUMO2P61956 95 aaKnown RBP12.03□□□□□ -0.48
TRIO-222ENST00000515144 FAM71F2Q6NXP2 309 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 WDR87Q6ZQQ6 2873 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 TFF3Q07654 80 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 PRSS33Q8NF86 280 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 PQLC2LA1A4F0 135 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 RPRMLQ8N4K4 120 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 SLC25A38Q96DW6 304 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 WBP1Q96G27 269 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
TRIO-222ENST00000515144 PHYHIPLQ96FC7 376 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 COL8A2P25067 703 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 RUSC1-AS1Q66K80 236 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 TMEM200BQ69YZ2 307 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 C12orf54Q6X4T0 127 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 CLRN3Q8NCR9 226 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 PLPPR1Q8TBJ4 325 aa12.03□□□□□ -0.48
TRIO-222ENST00000515144 CD7P09564 240 aa12.02□□□□□ -0.48
TRIO-222ENST00000515144 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.48
TRIO-222ENST00000515144 EFNA4P52798 201 aa12.02□□□□□ -0.48
TRIO-222ENST00000515144 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.48
TRIO-222ENST00000515144 MEIG1Q5JSS6 88 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 ZNF256Q9Y2P7 627 aaPredicted RBP12.02□□□□□ -0.49
TRIO-222ENST00000515144 TNFRSF18Q9Y5U5 241 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 RAB24Q969Q5 203 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 FAM74A3Q4VXF1 159 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 BEND2Q8NDZ0 799 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 GPR132Q9UNW8 380 aa12.02□□□□□ -0.49
TRIO-222ENST00000515144 GTF2H5Q6ZYL4 71 aa12.01□□□□□ -0.49
TRIO-222ENST00000515144 OR10W1Q8NGF6 305 aa12.01□□□□□ -0.49
TRIO-222ENST00000515144 TMEM167AQ8TBQ9 72 aa12.01□□□□□ -0.49
TRIO-222ENST00000515144 TECTAO75443 2155 aa12.01□□□□□ -0.49
TRIO-222ENST00000515144 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms