RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 RPRMQ9NS64 109 aa3.02□□□□□ -1.93
CAST-242ENST00000515063 OR1A1Q9P1Q5 309 aa3.02□□□□□ -1.93
CAST-242ENST00000515063 JPT1Q9UK76 154 aa3.02□□□□□ -1.93
CAST-242ENST00000515063 IGHV2OR16-5A0A0B4J2B6 119 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 TRGV8A0A0C4DH27 118 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 IGHV4-61A0A0C4DH41 118 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ODAMA1E959 279 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 SMCO3A2RU48 225 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 MAP1LC3B2A6NCE7 125 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 OR5H1A6NKK0 313 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 SEC14L6B5MCN3 397 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 H0YL77 283 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 C15orf65H3BRN8 121 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 CYB5BO43169 146 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 TNFSF12O43508 249 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 TIMM8AO60220 97 aaPredicted RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 ZNF737O75373 536 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 EIF3GO75821 320 aaKnown RBP eCLIP3.01□□□□□ -1.93
CAST-242ENST00000515063 VENTXO95231 258 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 CLDN1O95832 211 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 IGHV3-13P01766 116 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 IGHV4-59P01825 116 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 HBZP02008 142 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 OPN1MWP04001 364 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 METTL15P1P0C7V9 234 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 CECR9P0C854 216 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 OPN1MW2P0DN77 364 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 OPN1MW3P0DN78 364 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 S100PP25815 95 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 GLRXP35754 106 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 RPL35P42766 123 aaKnown RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 CDX1P47902 265 aaPredicted RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 PSMB3P49720 205 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 RAB7AP51149 207 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 SPCS3P61009 180 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 B2MP61769 119 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 CCL20P78556 96 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 RUNX1Q01196 453 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ELOBQ15370 118 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 POU2AF1Q16633 256 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ACOT6Q3I5F7 207 aaPredicted RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 ALKBH6Q3KRA9 238 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 Q3ZCU0 254 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 SPANXN5Q5MJ07 72 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 TIMM23BQ5SRD1 257 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 IGFL3Q6UXB1 125 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 WDR82Q6UXN9 313 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 CYP2G1PQ6ZSU1 146 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 BHLHA15Q7RTS1 189 aaPredicted RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 H2BFWTQ7Z2G1 175 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 C5orf24Q7Z6I8 188 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 KRTAP7-1Q8IUC3 87 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 TGIF2LYQ8IUE0 185 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 BATF2Q8N1L9 274 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 CYB561D1Q8N8Q1 229 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ZNF709Q8N972 641 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ZNF383Q8NA42 475 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 THAP8Q8NA92 274 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 OR1L1Q8NH94 360 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 DTD1Q8TEA8 209 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 FAM222BQ8WU58 562 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 S100PBPQ96BU1 408 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 LINC00479Q96M42 142 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 PYGO2Q9BRQ0 406 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ACTR3CQ9C0K3 210 aaPredicted RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 MAP1LC3BQ9GZQ8 125 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 PARP12Q9H0J9 701 aaKnown RBP3.01□□□□□ -1.93
CAST-242ENST00000515063 OR2D2Q9H210 308 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 RBKSQ9H477 322 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 LINC00574Q9H8X3 128 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ASCL3Q9NQ33 180 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 KCNIP2Q9NS61 270 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 SLC39A9Q9NUM3 307 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 NAT8Q9UHE5 227 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 PPP1R3CQ9UQK1 317 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 PUS1Q9Y606 427 aaKnown RBP eCLIP3.01□□□□□ -1.93
CAST-242ENST00000515063 SLC25A15Q9Y619 301 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 ARID1AO14497 2285 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 AHCTF1Q8WYP5 2266 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 KNTC1P50748 2209 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 KIAA2026Q5HYC2 2103 aa3.01□□□□□ -1.93
CAST-242ENST00000515063 LAMA1P25391 3075 aa3□□□□□ -1.93
CAST-242ENST00000515063 TANC2Q9HCD6 1990 aa3□□□□□ -1.93
CAST-242ENST00000515063 ZDBF2Q9HCK1 2354 aa3□□□□□ -1.93
CAST-242ENST00000515063 IGLV3-9A0A075B6K5 115 aa3□□□□□ -1.93
CAST-242ENST00000515063 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
CAST-242ENST00000515063 IGHV1-18A0A0C4DH31 117 aa3□□□□□ -1.93
CAST-242ENST00000515063 A0A1W2PRV1 198 aa3□□□□□ -1.93
CAST-242ENST00000515063 ZNF727A8MUV8 499 aa3□□□□□ -1.93
CAST-242ENST00000515063 F6UZH7 168 aa3□□□□□ -1.93
CAST-242ENST00000515063 H3BP45 60 aa3□□□□□ -1.93
CAST-242ENST00000515063 PPP1R2P9O14990 202 aa3□□□□□ -1.93
CAST-242ENST00000515063 TNFSF13O75888 250 aa3□□□□□ -1.93
CAST-242ENST00000515063 LYZL6O75951 148 aa3□□□□□ -1.93
CAST-242ENST00000515063 KBTBD11O94819 623 aa3□□□□□ -1.93
CAST-242ENST00000515063 S1PR2O95136 353 aa3□□□□□ -1.93
CAST-242ENST00000515063 LHBP01229 141 aa3□□□□□ -1.93
CAST-242ENST00000515063 TYMSP04818 313 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms