RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 IGKV1D-43A0A0B4J1Z2 117 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 IRGMA1A4Y4 181 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 FABP5P3A8MUU1 101 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 ZNF189O75820 626 aaPredicted RBP2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 ZNF682O95780 498 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 IFNA10P01566 189 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 IGKV1-5P01602 117 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 CYBAP13498 195 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 EMP1P54849 157 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 RAB14P61106 215 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 IBA57Q5T440 356 aaKnown RBP2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 LYZL1Q6UWQ5 148 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 OR11H6Q8NGC7 330 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 NDUFB11Q9NX14 153 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 TP73-AS1Q9UF72 201 aa2.48□□□□□ -2.01
CALCOCO2-222ENST00000514006 TRAV38-1A0A0B4J264 116 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 MUC21A0A0G2JKD1 596 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 MUC21A0A140T8X8 626 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 FNDC10F2Z333 226 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 IGHV3-7P01780 117 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 MSMBP08118 114 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 LGALS1P09382 135 aaKnown RBP2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 SULT1A3P0DMM9 295 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 SULT1A4P0DMN0 295 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 LGALS3P17931 250 aaKnown RBP2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 PPIBP23284 216 aaKnown RBP2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 ERP29P30040 261 aaKnown RBP2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 HINT1P49773 126 aaPredicted RBP2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 H1FXQ92522 213 aaKnown RBP2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 SLC7A6Q92536 515 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 Q9BRP9 147 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 GID8Q9NWU2 228 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 CPAMD8Q8IZJ3 1885 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 SLIT2O94813 1529 aa2.47□□□□□ -2.01
CALCOCO2-222ENST00000514006 HSPE1P61604 102 aaKnown RBP2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 ZNF90Q03938 601 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 POU6F1Q14863 301 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 MOGQ16653 247 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 GOLT1AQ6ZVE7 132 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 LYG2Q86SG7 212 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 C12orf45Q8N5I9 185 aaPredicted RBP2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 OR4X2Q8NGF9 303 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 SELENOSQ9BQE4 189 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 CYSLTR1Q9Y271 337 aa2.46□□□□□ -2.02
CALCOCO2-222ENST00000514006 ECM29Q5VYK3 1845 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 MYH2Q9UKX2 1941 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 TRAV7A0A075B6U4 112 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 H7C2G1 150 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 SLC22A1O15245 554 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 SMIM17P0DL12 118 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 EVX1P49640 407 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 ARHGAP11BQ3KRB8 267 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 SPANXN3Q5MJ09 141 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 DYNAPQ8N1N2 210 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 RPP25LQ8N5L8 163 aaKnown RBP2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 SLC25A40Q8TBP6 338 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 NEK7Q8TDX7 302 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 PARVBQ9HBI1 364 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 ATPIF1Q9UII2 106 aa2.45□□□□□ -2.02
CALCOCO2-222ENST00000514006 MYH3P11055 1940 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 IGHV3-64A0A075B6Q5 118 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 RFPL4AA6NLU0 287 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 RFPL4AL1F8VTS6 287 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 C3orf84H3BNL1 204 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 ATG12O94817 140 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 PPBPP02775 128 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 DEFA3P59666 94 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 ERHP84090 104 aaKnown RBP2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 Q6Q795 121 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 RASSF5Q8WWW0 418 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 DNAJC30Q96LL9 226 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 TVP23BQ9NYZ1 205 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 UTP11Q9Y3A2 253 aaKnown RBP2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 V9GYQ6 96 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 NEO1Q92859 1461 aa2.44□□□□□ -2.02
CALCOCO2-222ENST00000514006 NCKAP5O14513 1909 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 TRAPPC13A5PLN9 417 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 HMGB3O15347 200 aaKnown RBP2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 IFNA1P01562 189 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 DEFA4P12838 97 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 RPS4Y1P22090 263 aaKnown RBP2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 NFYAP23511 347 aaPredicted RBP2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 SS18Q15532 418 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 GPR146Q96CH1 333 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 C2orf50Q96LR7 162 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 HOPXQ9BPY8 73 aaPredicted RBP2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 CHST6Q9GZX3 395 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 SLC39A9Q9NUM3 307 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 PYCARDQ9ULZ3 195 aa2.43□□□□□ -2.02
CALCOCO2-222ENST00000514006 KDM5BQ9UGL1 1544 aa2.42□□□□□ -2.02
CALCOCO2-222ENST00000514006 MYH7BA7E2Y1 1941 aa2.42□□□□□ -2.02
CALCOCO2-222ENST00000514006 ADAMTS7Q9UKP4 1686 aa2.42□□□□□ -2.02
CALCOCO2-222ENST00000514006 IGHV1-18A0A0C4DH31 117 aa2.42□□□□□ -2.02
CALCOCO2-222ENST00000514006 SIGLEC16A6NMB1 481 aa2.42□□□□□ -2.02
CALCOCO2-222ENST00000514006 S1PR2O95136 353 aa2.42□□□□□ -2.02
CALCOCO2-222ENST00000514006 FABP1P07148 127 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms