RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 FAM3DQ96BQ1 224 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 FAM210BQ96KR6 192 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 AIFM2Q9BRQ8 373 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 QTRT1Q9BXR0 403 aaKnown RBP6.42□□□□□ -1.38
CAST-239ENST00000513666 COMMD5Q9GZQ3 224 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 MS4A6AQ9H2W1 248 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 TMEM14BQ9NUH8 114 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 SPATA2Q9UM82 520 aa6.42□□□□□ -1.38
CAST-239ENST00000513666 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.42□□□□□ -1.38
CAST-239ENST00000513666 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 TRAV3A0A0B4J244 114 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 IGKV1D-13A0A0B4J2D9 117 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 ERICH4A6NGS2 130 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 K7EIM0 57 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 DNASE2O00115 360 aaPredicted RBP6.41□□□□□ -1.38
CAST-239ENST00000513666 UPK2O00526 184 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 NUPL2O15504 423 aaKnown RBP6.41□□□□□ -1.38
CAST-239ENST00000513666 CIB2O75838 187 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 FGF2P09038 288 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 OR13C7P0DN81 318 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 IGKV1-13P0DP09 117 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 GNB3P16520 340 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 NFYAP23511 347 aaPredicted RBP6.41□□□□□ -1.38
CAST-239ENST00000513666 RASSF2P50749 326 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 CLDN12P56749 244 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 WT1-ASQ06250 92 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 C2orf76Q3KRA6 126 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 Q56UQ5 140 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 THOC7Q6I9Y2 204 aaKnown RBP6.41□□□□□ -1.38
CAST-239ENST00000513666 ZNF66Q6ZN08 573 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 OR10R2Q8NGX6 335 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 TAS2R8Q9NYW2 309 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 RAB22AQ9UL26 194 aa6.41□□□□□ -1.38
CAST-239ENST00000513666 TMEM272A0A1B0GTI8 110 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 YIF1AO95070 293 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 CTXN2P0C2S0 81 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 HIST1H1DP16402 221 aaKnown RBP6.4□□□□□ -1.38
CAST-239ENST00000513666 GADD45AP24522 165 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 TALDO1P37837 337 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 POU2AF1Q16633 256 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 ZFP1Q6P2D0 407 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 HSD17B13Q7Z5P4 300 aaPredicted RBP6.4□□□□□ -1.38
CAST-239ENST00000513666 NANOGP1Q8N7R0 232 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 DUSP18Q8NEJ0 188 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 ST8SIA2Q92186 375 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 GPHA2Q96T91 129 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 VSIRQ9H7M9 311 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 CLEC5AQ9NY25 188 aa6.4□□□□□ -1.38
CAST-239ENST00000513666 AK6Q9Y3D8 172 aaKnown RBP6.4□□□□□ -1.38
CAST-239ENST00000513666 F11RQ9Y624 299 aaKnown RBP6.4□□□□□ -1.38
CAST-239ENST00000513666 A0A075B6Q4 140 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 EPM2AB3EWF7 344 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 ST8SIA3O43173 380 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 RBFOX2O43251 390 aaKnown RBP eCLIP6.4□□□□□ -1.39
CAST-239ENST00000513666 EIF4EP06730 217 aaKnown RBP6.4□□□□□ -1.39
CAST-239ENST00000513666 TRAPPC2P0DI81 140 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 TRAPPC2BP0DI82 140 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 DTYMKP23919 212 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 RANBP1P43487 201 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 TAS2R31P59538 309 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 ZNF773Q6PK81 442 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 SPAG16Q8N0X2 631 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 LILRB2Q8N423 598 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 RNF167Q9H6Y7 350 aa6.4□□□□□ -1.39
CAST-239ENST00000513666 TEX50A0A1B0GTY4 177 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 KNCNA6PVL3 124 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 APOHP02749 345 aaPredicted RBP6.39□□□□□ -1.39
CAST-239ENST00000513666 INAFM2P0DMQ5 153 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 NQO2P16083 231 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 FAM3BP58499 235 aaPredicted RBP6.39□□□□□ -1.39
CAST-239ENST00000513666 UBE2UQ5VVX9 321 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 AHSA2Q719I0 299 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 C6orf223Q8N319 242 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 GRAMD2BQ96HH9 432 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 NXF2Q9GZY0 626 aaKnown RBP6.39□□□□□ -1.39
CAST-239ENST00000513666 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 RABAC1Q9UI14 185 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 PSORS1C1Q9UIG5 152 aa6.39□□□□□ -1.39
CAST-239ENST00000513666 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 K7EQG2 157 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 TNFSF12O43508 249 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 HPRT1P00492 218 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 SPART-AS1P0CW21 52 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 MFAP4P55083 255 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 RPL11P62913 178 aaKnown RBP6.38□□□□□ -1.39
CAST-239ENST00000513666 MSMO1Q15800 293 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 CNIH2Q6PI25 160 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 OR1L8Q8NGR8 309 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 LSM10Q969L4 123 aaKnown RBP6.38□□□□□ -1.39
CAST-239ENST00000513666 TXN2Q99757 166 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 DCSTAMPQ9H295 470 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 NDUFA4L2Q9NRX3 87 aa6.38□□□□□ -1.39
CAST-239ENST00000513666 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
CAST-239ENST00000513666 IGHV3-66A0A0C4DH42 116 aa6.37□□□□□ -1.39
CAST-239ENST00000513666 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
CAST-239ENST00000513666 ATP5HO75947 161 aa6.37□□□□□ -1.39
CAST-239ENST00000513666 ACTL10Q5JWF8 245 aa6.37□□□□□ -1.39
CAST-239ENST00000513666 HES5Q5TA89 166 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms