RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TBC1D24Q9ULP9 559 aa7.85□□□□□ -1.15
DDX41-216ENST00000513562 YIF1AO95070 293 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 TRAPPC2P0DI81 140 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 TRAPPC2BP0DI82 140 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 NQO2P16083 231 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 TNP2Q05952 138 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 SPHARQ15513 63 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 MSMO1Q15800 293 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 HES5Q5TA89 166 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 ZNF773Q6PK81 442 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 ST8SIA2Q92186 375 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 VSIRQ9H7M9 311 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 TMEM14BQ9NUH8 114 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 TMEM140Q9NV12 185 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 V9GY05 133 aa7.84□□□□□ -1.15
DDX41-216ENST00000513562 DNASE2O00115 360 aaPredicted RBP7.83□□□□□ -1.16
DDX41-216ENST00000513562 TNFSF12O43508 249 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 HPRT1P00492 218 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 RAB6AP20340 208 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 CALRP27797 417 aaKnown RBP7.83□□□□□ -1.16
DDX41-216ENST00000513562 RNF212Q495C1 297 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 CNIH2Q6PI25 160 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 LILRB2Q8N423 598 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 BPIFB6Q8NFQ5 453 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 UFD1Q92890 307 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 LSM10Q969L4 123 aaKnown RBP7.83□□□□□ -1.16
DDX41-216ENST00000513562 FAM210BQ96KR6 192 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 NXF2Q9GZY0 626 aaKnown RBP7.83□□□□□ -1.16
DDX41-216ENST00000513562 DCSTAMPQ9H295 470 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 S100A14Q9HCY8 104 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 NDUFA4L2Q9NRX3 87 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 CLEC5AQ9NY25 188 aa7.83□□□□□ -1.16
DDX41-216ENST00000513562 TEX50A0A1B0GTY4 177 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 SULT1C2O00338 296 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 ST8SIA3O43173 380 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 APOHP02749 345 aaPredicted RBP7.82□□□□□ -1.16
DDX41-216ENST00000513562 EIF4EP06730 217 aaKnown RBP7.82□□□□□ -1.16
DDX41-216ENST00000513562 GNAO1P09471 354 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 NPY1RP25929 384 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 RPS25P62851 125 aaKnown RBP7.82□□□□□ -1.16
DDX41-216ENST00000513562 ARL6IP1Q15041 203 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 C10orf67Q8IYJ2 551 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 DUSP18Q8NEJ0 188 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 DMBX1Q8NFW5 382 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 OR1L8Q8NGR8 309 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 GINS3Q9BRX5 216 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 PLEKHA2Q9HB19 425 aa7.82□□□□□ -1.16
DDX41-216ENST00000513562 METTL21EPA6NDL7 271 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 KNCNA6PVL3 124 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 PSMA1P25786 263 aaKnown RBP7.81□□□□□ -1.16
DDX41-216ENST00000513562 TRAM1Q15629 374 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 UBE2UQ5VVX9 321 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 HACD4Q5VWC8 232 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 ZNF367Q7RTV3 350 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 C8orf59Q8N0T1 100 aaPredicted RBP7.81□□□□□ -1.16
DDX41-216ENST00000513562 DHRSXQ8N5I4 330 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 GRAMD2BQ96HH9 432 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 TXN2Q99757 166 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 CCL28Q9NRJ3 127 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 RABAC1Q9UI14 185 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 ANXA10Q9UJ72 324 aa7.81□□□□□ -1.16
DDX41-216ENST00000513562 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 I3L2K1 104 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 K7EQG2 157 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 MFAP4P55083 255 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 RPL11P62913 178 aaKnown RBP7.8□□□□□ -1.16
DDX41-216ENST00000513562 CATR1Q13166 79 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 CDNFQ49AH0 187 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 TOMM20LQ6UXN7 152 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 ZBTB34Q8NCN2 500 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 OR13F1Q8NGS4 319 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 OR1P1Q8NH06 330 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 NUDCD2Q8WVJ2 157 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 SECTM1Q8WVN6 248 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 SLC25A46Q96AG3 418 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 HINT2Q9BX68 163 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 COMMD9Q9P000 198 aa7.8□□□□□ -1.16
DDX41-216ENST00000513562 IFITM5A6NNB3 132 aa7.79□□□□□ -1.16
DDX41-216ENST00000513562 OR10A3P58181 314 aa7.79□□□□□ -1.16
DDX41-216ENST00000513562 FABP5Q01469 135 aa7.79□□□□□ -1.16
DDX41-216ENST00000513562 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
DDX41-216ENST00000513562 ZFAND3Q9H8U3 227 aa7.79□□□□□ -1.16
DDX41-216ENST00000513562 OR51B2Q9Y5P1 312 aa7.79□□□□□ -1.16
DDX41-216ENST00000513562 DMBT1Q9UGM3 2413 aaPredicted RBP7.79□□□□□ -1.16
DDX41-216ENST00000513562 FAT1Q14517 4588 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 TMEM235A6NFC5 223 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 MARCH11A6NNE9 402 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 SSX5O60225 188 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 PPYP01298 95 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 ZNF688P0C7X2 276 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 SPART-AS1P0CW21 52 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 FCGR2CP31995 323 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 FAM3BP58499 235 aaPredicted RBP7.78□□□□□ -1.16
DDX41-216ENST00000513562 ERVK-16P61578 105 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 RCN1Q15293 331 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 CADM3Q8N126 398 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 PACRGLQ8N7B6 248 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 STXBP6Q8NFX7 210 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 OR51H1Q8NH63 302 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 DCANP1Q8TF63 244 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms