RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PRSS8Q16651 343 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 KIAA1644Q3SXP7 199 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 SLC22A6Q4U2R8 563 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 RPL39P5Q59GN2 51 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 RAB12Q6IQ22 244 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 PET117Q6UWS5 81 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 CLEC19AQ6UXS0 136 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 TMEM182Q6ZP80 229 aaPredicted RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 SSX6Q7RTT6 188 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 APRG1Q8IVJ8 170 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 MMD2Q8IY49 270 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 C15orf53Q8NAA6 179 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 OR13C3Q8NGS6 347 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 OR10AC1Q8NH08 325 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 SETD6Q8TBK2 473 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 GIMAP1Q8WWP7 306 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 SRSF12Q8WXF0 261 aaKnown RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 EEF1AKMT3Q96AZ1 226 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 CMTM5Q96DZ9 223 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 ABHD14BQ96IU4 210 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 CHRDL1Q9BU40 450 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 YTHDF1Q9BYJ9 559 aaKnown RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 ZNF436Q9C0F3 470 aaPredicted RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 RIMS4Q9H426 269 aaPredicted RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 DAZ1Q9NQZ3 744 aaKnown RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 TMEM14BQ9NUH8 114 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 THYN1Q9P016 225 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 RABL2AQ9UBK7 228 aaPredicted RBP2.56□□□□□ -2
PDLIM5-218ENST00000513341 GHRLQ9UBU3 117 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 ZNF221Q9UK13 617 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 TMED3Q9Y3Q3 217 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 PEX16Q9Y5Y5 336 aa2.56□□□□□ -2
PDLIM5-218ENST00000513341 IGLV9-49A0A0B4J1Y8 123 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TRAV2A0A0B4J234 112 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TEX48A0A1B0GUV7 120 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 A0A1B0GW64 132 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TMEM189A5PLL7 270 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 ERICH4A6NGS2 130 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 OR4C45A6NMZ5 311 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 NDUFA4O00483 81 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 PRKYO43930 277 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 S1PR2O95136 353 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 CDRT1O95170 752 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 OXTP01178 125 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 IFNA5P01569 189 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 PRH1P02810 166 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 REG1AP05451 166 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 CD2P06729 351 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 CTSDP07339 412 aaPredicted RBP2.55□□□□□ -2
PDLIM5-218ENST00000513341 HTR1AP08908 422 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 ZBTB25P24278 435 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 PTBP1P26599 531 aaKnown RBP eCLIP2.55□□□□□ -24e-6■■■■□ 21.1
PDLIM5-218ENST00000513341 MAS1LP35410 378 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 ZNF93P35789 620 aaPredicted RBP2.55□□□□□ -2
PDLIM5-218ENST00000513341 CEACAM6P40199 344 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 DEFA5Q01523 94 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 GNMTQ14749 295 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 HMGN3Q15651 99 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TNXAQ16473 311 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 VMA21Q3ZAQ7 101 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TMEM236Q5W0B7 351 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 PLET1Q6UQ28 207 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 UNQ9165/PRO28630Q6UXU0 137 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 CDH26Q8IXH8 852 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 IQCF2Q8IXL9 164 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 ARHGAP24Q8N264 748 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 ZNF383Q8NA42 475 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 CSNK1G2-AS1Q8NCQ2 148 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 OR51A4Q8NGJ6 313 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 OR10K1Q8NGX5 313 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 MRPL30Q8TCC3 161 aaKnown RBP2.55□□□□□ -2
PDLIM5-218ENST00000513341 TMEM190Q8WZ59 177 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 NRBF2Q96F24 287 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 MRPL48Q96GC5 212 aaKnown RBP2.55□□□□□ -2
PDLIM5-218ENST00000513341 OR2A7Q96R45 310 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 UQCC2Q9BRT2 126 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 RIBC2Q9H4K1 309 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TMEM138Q9NPI0 162 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 SLC35D1Q9NTN3 355 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 ZNF581Q9P0T4 197 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 SMPXQ9UHP9 88 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 GNG8Q9UK08 70 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 BLOC1S6Q9UL45 172 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TBC1D24Q9ULP9 559 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 MGAT4AQ9UM21 535 aa2.55□□□□□ -2
PDLIM5-218ENST00000513341 TMEM212A6NML5 194 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 SRRM4A7MD48 611 aaKnown RBP2.54□□□□□ -2
PDLIM5-218ENST00000513341 GNGT2O14610 69 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 CYB5BO43169 146 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 ST8SIA3O43173 380 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 CST1P01037 141 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 GIG44P09565 113 aaPredicted RBP2.54□□□□□ -2
PDLIM5-218ENST00000513341 APELAP0DMC3 54 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 SERPINA2P20848 420 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 PRDX6P30041 224 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 GNRHRP30968 328 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 CCL18P55774 89 aa2.54□□□□□ -2
PDLIM5-218ENST00000513341 NUTF2P61970 127 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms