RNA–Protein interactions for RNA: ENST00000513325.5

HERC3-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-211ENST00000513325 KCTD21Q4G0X4 260 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 Q56UQ5 140 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 LYG2Q86SG7 212 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 CADM3Q8N126 398 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 OR6F1Q8NGZ6 308 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 ATP6V0BQ99437 205 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
HERC3-211ENST00000513325 PRSS3P35030 304 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 BMI1P35226 326 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 LSM3P62310 102 aaKnown RBP12.54□□□□□ -0.4
HERC3-211ENST00000513325 TNFRSF9Q07011 255 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 LYSMD2Q8IV50 215 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 FKBP11Q9NYL4 201 aa12.54□□□□□ -0.4
HERC3-211ENST00000513325 OR4C46A6NHA9 309 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 UBE2CO00762 179 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 CTSDP07339 412 aaPredicted RBP12.53□□□□□ -0.4
HERC3-211ENST00000513325 CTSGP08311 255 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
HERC3-211ENST00000513325 HLA-DMAP28067 261 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 HRH1P35367 487 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 STPG3Q8N7X2 389 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 OR5B3Q8NH48 314 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
HERC3-211ENST00000513325 ALMS1Q8TCU4 4167 aa12.52□□□□□ -0.4
HERC3-211ENST00000513325 KIR2DL5BA0A0G2JN68 375 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 KIR2DL5BA0A0G2JPC4 375 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 C15orf61A6NNL5 157 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 C15orf62A8K5M9 175 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 LY6G6CO95867 125 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 KIR2DL5AQ8N109 375 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 KIR2DL5BQ8NHK3 375 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 RNF183Q96D59 192 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 YIPF6Q96EC8 236 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 ZNF414Q96IQ9 312 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 SMPXQ9UHP9 88 aa12.52□□□□□ -0.41
HERC3-211ENST00000513325 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
HERC3-211ENST00000513325 TSPAN5P62079 268 aa12.51□□□□□ -0.41
HERC3-211ENST00000513325 GPX8Q8TED1 209 aa12.51□□□□□ -0.41
HERC3-211ENST00000513325 SLC25A46Q96AG3 418 aa12.51□□□□□ -0.41
HERC3-211ENST00000513325 RNF2Q99496 336 aa12.51□□□□□ -0.41
HERC3-211ENST00000513325 IGHV3-49A0A0A0MS15 119 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 IGHV7-4-1A0A0J9YVY3 117 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 I3L2K1 104 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 NUPL2O15504 423 aaKnown RBP12.5□□□□□ -0.41
HERC3-211ENST00000513325 YIF1AO95070 293 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 EIF4EP06730 217 aaKnown RBP12.5□□□□□ -0.41
HERC3-211ENST00000513325 RELQ04864 619 aaPredicted RBP12.5□□□□□ -0.41
HERC3-211ENST00000513325 LPCAT3Q6P1A2 487 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
HERC3-211ENST00000513325 TBC1D26Q86UD7 250 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 GALNT14Q96FL9 552 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 SEC22AQ96IW7 307 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 RHPN1-AS1Q9BWJ2 59 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
HERC3-211ENST00000513325 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
HERC3-211ENST00000513325 CHEK1O14757 476 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 IGKV1-39P01597 117 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 IGHV3-48P01763 117 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 IGKV1D-39P04432 117 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 S100GP29377 79 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 MFAP4P55083 255 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 ZNF124Q15973 351 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 OR4A16Q8NH70 328 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 COMMD3Q9UBI1 195 aa12.49□□□□□ -0.41
HERC3-211ENST00000513325 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
HERC3-211ENST00000513325 MT-CO2P00403 227 aa12.48□□□□□ -0.41
HERC3-211ENST00000513325 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
HERC3-211ENST00000513325 TFPI2P48307 235 aa12.48□□□□□ -0.41
HERC3-211ENST00000513325 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
HERC3-211ENST00000513325 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
HERC3-211ENST00000513325 TXN2Q99757 166 aa12.48□□□□□ -0.41
HERC3-211ENST00000513325 IGHV3OR16-13A0A075B7E8 117 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 TRAV14DV4A0A0A6YYC5 116 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 IGHV3-74A0A0B4J1X5 117 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 SMIM31A0A1B0GVY4 71 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 APOA1P02647 267 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 ATF4P18848 351 aaPredicted RBP12.47□□□□□ -0.41
HERC3-211ENST00000513325 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
HERC3-211ENST00000513325 PRCDQ00LT1 54 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 TMEM217Q8N7C4 229 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 MRGPRFQ96AM1 343 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
HERC3-211ENST00000513325 C6orf62Q9GZU0 229 aaPredicted RBP12.47□□□□□ -0.41
HERC3-211ENST00000513325 NXF2Q9GZY0 626 aaKnown RBP12.47□□□□□ -0.41
HERC3-211ENST00000513325 SCPEP1Q9HB40 452 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 VCX3AQ9NNX9 186 aa12.47□□□□□ -0.41
HERC3-211ENST00000513325 A0A087WXM4 84 aa12.46□□□□□ -0.41
HERC3-211ENST00000513325 GNG7O60262 68 aa12.46□□□□□ -0.41
HERC3-211ENST00000513325 UCP3P55916 312 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms