RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 TSC22D3Q99576 134 aa12.53□□□□□ -0.4
MATR3-220ENST00000512876 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
MATR3-220ENST00000512876 CHRDL1Q9BU40 450 aa12.53□□□□□ -0.4
MATR3-220ENST00000512876 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
MATR3-220ENST00000512876 HINT2Q9BX68 163 aa12.53□□□□□ -0.4
MATR3-220ENST00000512876 FKBP11Q9NYL4 201 aa12.53□□□□□ -0.4
MATR3-220ENST00000512876 NDUFA4O00483 81 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 IGKV1-39P01597 117 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 IGKV1D-39P04432 117 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 ELK1P19419 428 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 UCP3P55916 312 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 VBP1P61758 197 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 LPCAT3Q6P1A2 487 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.41
MATR3-220ENST00000512876 SNX29P2Q8IUI4 249 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 OR1L6Q8NGR2 347 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 TMEM56Q96MV1 263 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 BIRC6Q9NR09 4857 aa12.52□□□□□ -0.41
MATR3-220ENST00000512876 IGHV3-21A0A0B4J1V1 117 aa12.51□□□□□ -0.41
MATR3-220ENST00000512876 SMIM31A0A1B0GVY4 71 aa12.51□□□□□ -0.41
MATR3-220ENST00000512876 TSPAN4O14817 238 aa12.51□□□□□ -0.41
MATR3-220ENST00000512876 TSPAN5P62079 268 aa12.51□□□□□ -0.41
MATR3-220ENST00000512876 TBC1D26Q86UD7 250 aa12.51□□□□□ -0.41
MATR3-220ENST00000512876 SLC38A6Q8IZM9 456 aa12.51□□□□□ -0.41
MATR3-220ENST00000512876 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
MATR3-220ENST00000512876 K7EMT4 169 aa12.5□□□□□ -0.41
MATR3-220ENST00000512876 S100GP29377 79 aa12.5□□□□□ -0.41
MATR3-220ENST00000512876 FCGR2BP31994 310 aaPredicted RBP12.5□□□□□ -0.41
MATR3-220ENST00000512876 OR2C3Q8N628 320 aa12.5□□□□□ -0.41
MATR3-220ENST00000512876 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
MATR3-220ENST00000512876 OVOL2Q9BRP0 275 aa12.5□□□□□ -0.41
MATR3-220ENST00000512876 HPGDSO60760 199 aa12.49□□□□□ -0.41
MATR3-220ENST00000512876 CTSGP08311 255 aa12.49□□□□□ -0.41
MATR3-220ENST00000512876 ODF3L2Q3SX64 289 aa12.49□□□□□ -0.41
MATR3-220ENST00000512876 MRGPRFQ96AM1 343 aa12.49□□□□□ -0.41
MATR3-220ENST00000512876 C15orf62A8K5M9 175 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 I3L2K1 104 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 GABARAPO95166 117 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 RORCP51449 518 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 RND3P61587 244 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 LHFPL1Q86WI0 220 aa12.48□□□□□ -0.41
MATR3-220ENST00000512876 M0QYG6 137 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 P0C879 139 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 SMIM18P0DKX4 95 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
MATR3-220ENST00000512876 CTF1Q16619 201 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 Q56UQ5 140 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 LAMTOR1Q6IAA8 161 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 H2BFWTQ7Z2G1 175 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 UBAC2Q8NBM4 344 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
MATR3-220ENST00000512876 OR10C1Q96KK4 312 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 C20orf24Q9BUV8 137 aa12.47□□□□□ -0.41
MATR3-220ENST00000512876 NAA50Q9GZZ1 169 aaKnown RBP12.47□□□□□ -0.41
MATR3-220ENST00000512876 IGHV3OR16-8A0A075B7F1 116 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 RELQ04864 619 aaPredicted RBP12.46□□□□□ -0.41
MATR3-220ENST00000512876 WFDC3Q8IUB2 231 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 ARRDC1Q8N5I2 433 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 OR4A16Q8NH70 328 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 TXN2Q99757 166 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 KLK11Q9UBX7 282 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 UBQLN2Q9UHD9 624 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
MATR3-220ENST00000512876 OR4C46A6NHA9 309 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
MATR3-220ENST00000512876 JTBO76095 146 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 MT-CO2P00403 227 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 TBPP20226 339 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 MFAP4P55083 255 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 RNASE10Q5GAN6 216 aaKnown RBP12.45□□□□□ -0.42
MATR3-220ENST00000512876 MZT2AQ6P582 158 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 Q6ZWC4 215 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 OR52I2Q8NH67 350 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 AP3S1Q92572 193 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 MTFP1Q9UDX5 166 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
MATR3-220ENST00000512876 KIR2DL5BA0A0G2JN68 375 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 KIR2DL5BA0A0G2JPC4 375 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 IGHV7-4-1A0A0J9YVY3 117 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 INS-IGF2F8WCM5 200 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 ZNF207O43670 478 aaKnown RBP12.44□□□□□ -0.42
MATR3-220ENST00000512876 IGKV1-5P01602 117 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 CD3DP04234 171 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 CTSDP07339 412 aaPredicted RBP12.44□□□□□ -0.42
MATR3-220ENST00000512876 ZNF182P17025 639 aaPredicted RBP12.44□□□□□ -0.42
MATR3-220ENST00000512876 PI3P19957 117 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 APOC4P55056 127 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 KIR2DL5AQ8N109 375 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 KIR2DL5BQ8NHK3 375 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 TP53RKQ96S44 253 aa12.44□□□□□ -0.42
MATR3-220ENST00000512876 NXF2Q9GZY0 626 aaKnown RBP12.44□□□□□ -0.42
MATR3-220ENST00000512876 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
MATR3-220ENST00000512876 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
MATR3-220ENST00000512876 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
MATR3-220ENST00000512876 UBE2CO00762 179 aa12.43□□□□□ -0.42
MATR3-220ENST00000512876 CHEK1O14757 476 aa12.43□□□□□ -0.42
MATR3-220ENST00000512876 CD74P04233 296 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms