RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LAMTOR1Q6IAA8 161 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 GLYATQ6IB77 296 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
USP53-206ENST00000510737 SSX6Q7RTT6 188 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 C15orf53Q8NAA6 179 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 DRAXINQ8NBI3 349 aaPredicted RBP4.02□□□□□ -1.77
USP53-206ENST00000510737 PYURFQ96I23 114 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 C16orf45Q96MC5 204 aaPredicted RBP4.02□□□□□ -1.77
USP53-206ENST00000510737 YPEL2Q96QA6 119 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 TSNAXQ99598 290 aaKnown RBP4.02□□□□□ -1.77
USP53-206ENST00000510737 PHB2Q99623 299 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 SULT4A1Q9BR01 284 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 TAF9BQ9HBM6 251 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 GID8Q9NWU2 228 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 TRAPPC2LQ9UL33 140 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 TMEM14AQ9Y6G1 99 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 V9GYQ6 96 aa4.02□□□□□ -1.77
USP53-206ENST00000510737 IGHV3-35A0A0C4DH35 117 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 TNFRSF11BO00300 401 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 GEMIN2O14893 280 aaKnown RBP4.01□□□□□ -1.77
USP53-206ENST00000510737 OR7C1O76099 320 aaPredicted RBP4.01□□□□□ -1.77
USP53-206ENST00000510737 FUT3P21217 361 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 GALP22466 123 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 CMC4P56277 68 aaPredicted RBP4.01□□□□□ -1.77
USP53-206ENST00000510737 ACTR3P61158 418 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 HTD2P86397 168 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 GINS1Q14691 196 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 LY6G6FQ5SQ64 297 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 FAM71F2Q6NXP2 309 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 C19orf35Q6ZS72 473 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 GAPTQ8N292 157 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 TTC9CQ8N5M4 171 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 PXT1Q8NFP0 134 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 OR13C9Q8NGT0 318 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 ABHD14BQ96IU4 210 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 NIPSNAP1Q9BPW8 284 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 KCTD14Q9BQ13 255 aaPredicted RBP4.01□□□□□ -1.77
USP53-206ENST00000510737 ENOPH1Q9UHY7 261 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 JPT1Q9UK76 154 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 ST3GAL6Q9Y274 331 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 ETV7Q9Y603 341 aa4.01□□□□□ -1.77
USP53-206ENST00000510737 TEX48A0A1B0GUV7 120 aa4□□□□□ -1.77
USP53-206ENST00000510737 LOC107986453A0A1B0GWG9 222 aa4□□□□□ -1.77
USP53-206ENST00000510737 RAB29O14966 203 aa4□□□□□ -1.77
USP53-206ENST00000510737 MRPS14O60783 128 aaKnown RBP4□□□□□ -1.77
USP53-206ENST00000510737 CCNB2O95067 398 aa4□□□□□ -1.77
USP53-206ENST00000510737 IFNA5P01569 189 aa4□□□□□ -1.77
USP53-206ENST00000510737 P0C879 139 aa4□□□□□ -1.77
USP53-206ENST00000510737 OCM2P0CE71 109 aa4□□□□□ -1.77
USP53-206ENST00000510737 OCMP0CE72 109 aaPredicted RBP4□□□□□ -1.77
USP53-206ENST00000510737 RPA2P15927 270 aa4□□□□□ -1.77
USP53-206ENST00000510737 TFPI2P48307 235 aa4□□□□□ -1.77
USP53-206ENST00000510737 C6orf183Q5T699 404 aa4□□□□□ -1.77
USP53-206ENST00000510737 TEX47Q8TBZ9 253 aa4□□□□□ -1.77
USP53-206ENST00000510737 ATG101Q9BSB4 218 aa4□□□□□ -1.77
USP53-206ENST00000510737 AGMATQ9BSE5 352 aa4□□□□□ -1.77
USP53-206ENST00000510737 SLC2A9Q9NRM0 540 aa4□□□□□ -1.77
USP53-206ENST00000510737 PIPOXQ9P0Z9 390 aa4□□□□□ -1.77
USP53-206ENST00000510737 TBC1D24Q9ULP9 559 aa4□□□□□ -1.77
USP53-206ENST00000510737 AP3M1Q9Y2T2 418 aa4□□□□□ -1.77
USP53-206ENST00000510737 UFC1Q9Y3C8 167 aa4□□□□□ -1.77
USP53-206ENST00000510737 LINC00588Q9Y4M8 146 aa4□□□□□ -1.77
USP53-206ENST00000510737 BBIP1A8MTZ0 92 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 H3BN98 237 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 GABRPO00591 440 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 CDRT1O95170 752 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 MAS1P04201 325 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 FABP3P05413 133 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 SPART-AS1P0CW21 52 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 HTN3P15516 51 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 PSMB6P28072 239 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 VSNL1P62760 191 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 CDK5Q00535 292 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 RSU1Q15404 277 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
USP53-206ENST00000510737 LIPKQ5VXJ0 399 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
USP53-206ENST00000510737 SSX9Q7RTT3 188 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 SLC35F2Q8IXU6 374 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 OR51A4Q8NGJ6 313 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 OR52N1Q8NH53 320 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 NEK7Q8TDX7 302 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 TNFAIP8L1Q8WVP5 186 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 SRSF12Q8WXF0 261 aaKnown RBP3.99□□□□□ -1.77
USP53-206ENST00000510737 RNF2Q99496 336 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 ZNF436Q9C0F3 470 aaPredicted RBP3.99□□□□□ -1.77
USP53-206ENST00000510737 GORASP2Q9H8Y8 452 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 RAB9BQ9NP90 201 aa3.99□□□□□ -1.77
USP53-206ENST00000510737 IGKV3-7A0A075B6H7 116 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 METTL15A6NJ78 407 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 ZNF670-ZNF695F2Z2N8 137 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 HMGN1P05114 100 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 ISG15P05161 165 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 KRT8P05787 483 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 UBCP0CG48 685 aaKnown RBP3.98□□□□□ -1.77
USP53-206ENST00000510737 MEOX2P50222 304 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 RBM11P57052 281 aaKnown RBP3.98□□□□□ -1.77
USP53-206ENST00000510737 DEFB131AP59861 70 aa3.98□□□□□ -1.77
USP53-206ENST00000510737 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms