RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TRAV8-4A0A0B4J246 113 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 CCL1P22362 96 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 BTCP35070 178 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 ALPK3Q96L96 1907 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 THADAQ6YHU6 1953 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 PGPA6NDG6 321 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 CX3CL1P78423 397 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 LAIR2Q6ISS4 152 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 CD5LO43866 347 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 SCTP09683 121 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 ATXN8Q156A1 80 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 MDP1Q86V88 176 aa7.14□□□□□ -1.27
HTT-208ENST00000510626 DENND4AQ7Z401 1863 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 NPIPB11E5RHQ5 1161 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 APOHP02749 345 aaPredicted RBP7.13□□□□□ -1.27
HTT-208ENST00000510626 ACYP1P07311 99 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 ORMDL2Q53FV1 153 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 AMBPP02760 352 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 GFRALQ6UXV0 394 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 EML5Q05BV3 1969 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 RND2P52198 227 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 MBNL2Q5VZF2 373 aaKnown RBP7.13□□□□□ -1.27
HTT-208ENST00000510626 C14orf144Q96I85 54 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 C16orf92Q96LL3 132 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 SYNGR3O43761 229 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 FAM106AQ4KMX7 169 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 GDF15Q99988 308 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 TMEM160Q9NX00 188 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 RRHO14718 337 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 VKORC1L1Q8N0U8 176 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 TIMP4Q99727 224 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 ARHGAP21Q5T5U3 1957 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 C16orf97H3BN30 126 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 FCGR2BP31994 310 aaPredicted RBP7.13□□□□□ -1.27
HTT-208ENST00000510626 HCSTQ9UBK5 93 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 HBDP02042 147 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 ASPHD2Q6ICH7 369 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 H7C2G1 150 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 IGFBP3P17936 291 aaPredicted RBP7.13□□□□□ -1.27
HTT-208ENST00000510626 LINC01590Q5TEZ4 76 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 RNF182Q8N6D2 247 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 ZPLD1Q8TCW7 415 aa7.13□□□□□ -1.27
HTT-208ENST00000510626 Q6ZS49 121 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 SRSF12Q8WXF0 261 aaKnown RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 DNASE2BQ8WZ79 361 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 ZNF48Q96MX3 618 aaPredicted RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 NABP2Q9BQ15 211 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 RBMY1BA6NDE4 496 aaKnown RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 RBMY1EA6NEQ0 496 aaKnown RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 CRXO43186 299 aaPredicted RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 HOXA3O43365 443 aaPredicted RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 RBMY1DP0C7P1 496 aaKnown RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 RBMY1A1P0DJD3 496 aaKnown RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 RBMY1CP0DJD4 496 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 Q0VG73 95 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 SFTA2Q6UW10 78 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 COL5A3P25940 1745 aaPredicted RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 ZNF818PQ6ZRF7 136 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TSKUQ8WUA8 353 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TMEM54Q969K7 222 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 DLL3Q9NYJ7 618 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TMEM229AB2RXF0 380 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 GPR6P46095 362 aaPredicted RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 OR5AN1Q8NGI8 311 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 PDCD1Q15116 288 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 LYPD1Q8N2G4 141 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TMEM101Q96IK0 257 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 FOXQ1Q9C009 403 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 RNF224P0DH78 156 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 REG4Q9BYZ8 158 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TAL2Q16559 108 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 OR10W1Q8NGF6 305 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 MORN2Q502X0 79 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TMEM144Q7Z5S9 345 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 TRBV20OR9-2A0A075B6H5 130 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 ZNF205O95201 554 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 NBEAP1P0C6P0 100 aa7.12□□□□□ -1.27
HTT-208ENST00000510626 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
HTT-208ENST00000510626 DRD3P35462 400 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 DEFB109BQ30KR1 87 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 PSG4Q00888 419 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 UNC119Q13432 240 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 PLXNB3Q9ULL4 1909 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 H3BUT2 72 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 SLC25A20O43772 301 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 C1orf162Q8NEQ5 155 aaPredicted RBP7.11□□□□□ -1.27
HTT-208ENST00000510626 TMEM240Q5SV17 173 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 NEU1Q99519 415 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 PILRAQ9UKJ1 303 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 FOXS1O43638 330 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 XIRP1Q702N8 1843 aaKnown RBP7.11□□□□□ -1.27
HTT-208ENST00000510626 CNTFRP26992 372 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 C1QTNF5Q9BXJ0 243 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
HTT-208ENST00000510626 LEPP41159 167 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 RTN4RL2Q86UN3 420 aa7.11□□□□□ -1.27
HTT-208ENST00000510626 SCARF2Q96GP6 870 aaPredicted RBP7.11□□□□□ -1.27
HTT-208ENST00000510626 IDI2-AS1Q9NZ38 188 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms