RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
TPM3-220ENST00000509601 S100GP29377 79 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 CHRDL1Q9BU40 450 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 WFDC10AQ9H1F0 79 aa13.46□□□□□ -0.25
TPM3-220ENST00000509601 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 CYB5BO43169 146 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 PI3P19957 117 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 ADMP35318 185 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 ELLP55199 621 aaPredicted RBP13.45□□□□□ -0.26
TPM3-220ENST00000509601 RND3P61587 244 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 SPCS2Q15005 226 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 GPR141Q7Z602 305 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 OR2C3Q8N628 320 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 OR4D10Q8NGI6 311 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 PALMDQ9NP74 551 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 MRPL27Q9P0M9 148 aaKnown RBP13.45□□□□□ -0.26
TPM3-220ENST00000509601 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
TPM3-220ENST00000509601 TENM2Q9NT68 2774 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 CD74P04233 296 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 IFNA6P05013 189 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 HSPE1P61604 102 aaKnown RBP13.44□□□□□ -0.26
TPM3-220ENST00000509601 RNASE10Q5GAN6 216 aaKnown RBP13.44□□□□□ -0.26
TPM3-220ENST00000509601 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 H2BFWTQ7Z2G1 175 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 ARRDC1Q8N5I2 433 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 TMEM229BQ8NBD8 167 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 OR1L6Q8NGR2 347 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 OR1P1Q8NH06 330 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 OR4A16Q8NH70 328 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 MARC2Q969Z3 335 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 MRGPRFQ96AM1 343 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 BSCL2Q96G97 398 aaPredicted RBP13.44□□□□□ -0.26
TPM3-220ENST00000509601 ZNF486Q96H40 463 aaPredicted RBP13.44□□□□□ -0.26
TPM3-220ENST00000509601 ATP6V0BQ99437 205 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 HIPK2Q9H2X6 1198 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 C21orf62Q9NYP8 219 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 UFC1Q9Y3C8 167 aa13.44□□□□□ -0.26
TPM3-220ENST00000509601 SCAF4O95104 1147 aaKnown RBP13.43□□□□□ -0.26
TPM3-220ENST00000509601 CTSGP08311 255 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 IZUMO4Q1ZYL8 232 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 TERB2Q8NHR7 220 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 C15orf40Q8WUR7 153 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 TMEM190Q8WZ59 177 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 TP53RKQ96S44 253 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
TPM3-220ENST00000509601 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 I3L2K1 104 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 P0C879 139 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 LYL1P12980 280 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 PGAM2P15259 253 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 TBPP20226 339 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 PIGPP57054 158 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 PRCDQ00LT1 54 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 SPSB3Q6PJ21 355 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 RETNQ9HD89 108 aa13.42□□□□□ -0.26
TPM3-220ENST00000509601 A0A0B4J293 547 aa13.41□□□□□ -0.26
TPM3-220ENST00000509601 GABARAPH6UMI1 98 aa13.41□□□□□ -0.26
TPM3-220ENST00000509601 NDUFA4O00483 81 aa13.41□□□□□ -0.26
TPM3-220ENST00000509601 SLC16A13Q7RTY0 426 aa13.41□□□□□ -0.26
TPM3-220ENST00000509601 CLVS1Q8IUQ0 354 aaPredicted RBP13.41□□□□□ -0.26
TPM3-220ENST00000509601 C5orf66Q9H5L9 145 aa13.41□□□□□ -0.26
TPM3-220ENST00000509601 C3orf85A0A1B0GTC6 90 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 K7EMT4 169 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 RAB3DO95716 219 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 TAS2R19P59542 299 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 SP6Q3SY56 376 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 STEAP1BQ6NZ63 245 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 ZNF114Q8NC26 417 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 OR52B4Q8NGK2 314 aa13.4□□□□□ -0.26
TPM3-220ENST00000509601 HYDINQ4G0P3 5121 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 RGS5O15539 181 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
TPM3-220ENST00000509601 PPP5CP53041 499 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 Q56UQ5 140 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 RBPMS2Q6ZRY4 209 aaKnown RBP13.39□□□□□ -0.27
TPM3-220ENST00000509601 UBAC2Q8NBM4 344 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 OR13C8Q8NGS7 320 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 ZFAND1Q8TCF1 268 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 MARCH1Q8TCQ1 289 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 MISP3Q96FF7 219 aa13.39□□□□□ -0.27
TPM3-220ENST00000509601 RTBDNQ9BSG5 229 aaPredicted RBP13.39□□□□□ -0.27
TPM3-220ENST00000509601 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
TPM3-220ENST00000509601 IGHV3OR16-8A0A075B7F1 116 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 MT-CO2P00403 227 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 IGHV3-48P01763 117 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 CTSDP07339 412 aaPredicted RBP13.38□□□□□ -0.27
TPM3-220ENST00000509601 MFAP4P55083 255 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 MRPS10P82664 201 aaKnown RBP13.38□□□□□ -0.27
TPM3-220ENST00000509601 ERHP84090 104 aaKnown RBP13.38□□□□□ -0.27
TPM3-220ENST00000509601 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
TPM3-220ENST00000509601 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 SCGB2B2Q4G0G5 96 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 ZFAND6Q6FIF0 208 aa13.38□□□□□ -0.27
TPM3-220ENST00000509601 ISOC1Q96CN7 298 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms