RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ZMAT5Q9UDW3 170 aaKnown RBP11.39□□□□□ -0.59
HMGCL-208ENST00000509389 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 SPDEFO95238 335 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 ELANEP08246 267 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 CDX1P47902 265 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-208ENST00000509389 F2RL1P55085 397 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 ERVK-16P61578 105 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 RNF152Q8N8N0 203 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 RNASE11Q8TAA1 199 aaKnown RBP11.38□□□□□ -0.59
HMGCL-208ENST00000509389 FLYWCH2Q96CP2 140 aaKnown RBP11.38□□□□□ -0.59
HMGCL-208ENST00000509389 HARBI1Q96MB7 349 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 HSPB9Q9BQS6 159 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-208ENST00000509389 TMEM14BQ9NUH8 114 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 CACFD1Q9UGQ2 172 aa11.38□□□□□ -0.59
HMGCL-208ENST00000509389 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-208ENST00000509389 FXYD6-FXYD2A0A087WZ82 144 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 E5RGE8 158 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 CRYGBP07316 175 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
HMGCL-208ENST00000509389 LGALS7P47929 136 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 UBE2KP61086 200 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 CFHR3Q02985 330 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 TNFRSF9Q07011 255 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 MRGPRG-AS1Q2M3A8 158 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 ZNF546Q86UE3 836 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 OR8H1Q8NGG4 311 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 OR4A5Q8NH83 315 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 WWC2-AS2Q96NR7 200 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 NSG2Q9Y328 171 aa11.37□□□□□ -0.59
HMGCL-208ENST00000509389 MSGN1A6NI15 193 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 UPK2O00526 184 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 ARPC5O15511 151 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 KBTBD11O94819 623 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 TMEM50AO95807 157 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 IGHG4P01861 327 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 P2RY1P47900 373 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 PAX9P55771 341 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 TAS2R30P59541 319 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 S100A10P60903 97 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGCL-208ENST00000509389 OR2F1Q13607 317 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 ACOT7LQ6ZUV0 252 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 KCNRGQ8N5I3 272 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 ZNF257Q9Y2Q1 563 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 WSB1Q9Y6I7 421 aa11.36□□□□□ -0.59
HMGCL-208ENST00000509389 TRAV3A0A0B4J244 114 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 H7C2Y5 167 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 SHOXO15266 292 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 SYNGR2O43760 224 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 NDUFA3O95167 84 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 IGF1P05019 195 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 C9orf66Q5T8R8 295 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 TEX45Q8NA69 505 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 DCUN1D4Q92564 292 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 LYRM2Q9NU23 88 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-208ENST00000509389 ZNF580Q9UK33 172 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 LSM5Q9Y4Y9 91 aaKnown RBP11.35□□□□□ -0.59
HMGCL-208ENST00000509389 HSPB11Q9Y547 144 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 RYR3Q15413 4870 aa11.35□□□□□ -0.59
HMGCL-208ENST00000509389 A0A0D9SG52 128 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 INS-IGF2F8WCM5 200 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 LY86O95711 162 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 SCGB1D2O95969 90 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 RLN2P04090 185 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 PSMB8P28062 276 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 NPBQ8NG41 125 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 C4orf3Q8WVX3 66 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 RITA1Q96K30 269 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 PRR25Q96S07 402 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 TSNAXQ99598 290 aaKnown RBP11.34□□□□□ -0.59
HMGCL-208ENST00000509389 QTRT1Q9BXR0 403 aaKnown RBP11.34□□□□□ -0.59
HMGCL-208ENST00000509389 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
HMGCL-208ENST00000509389 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
HMGCL-208ENST00000509389 SEC14L6B5MCN3 397 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 L7N2F9 121 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 SSSCA1O60232 199 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 TSC22D2O75157 780 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-208ENST00000509389 S100A11P31949 105 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 OR2B8PP59922 312 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 SPCS3P61009 180 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 FHL3Q13643 280 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 SMIM8Q96KF7 97 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
HMGCL-208ENST00000509389 MED6O75586 246 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 PVALBP20472 110 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-208ENST00000509389 RPS16P62249 146 aaKnown RBP11.32□□□□□ -0.6
HMGCL-208ENST00000509389 SSBP2P81877 361 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-208ENST00000509389 PSG5Q15238 335 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 MMDQ15546 238 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
HMGCL-208ENST00000509389 TMUB2Q71RG4 321 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms