RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 VPS25Q9BRG1 176 aa1.55□□□□□ -2.16
PDE4D-218ENST00000509368 CXorf21Q9HAI6 301 aa1.55□□□□□ -2.16
PDE4D-218ENST00000509368 DAZ3Q9NR90 486 aaKnown RBP1.55□□□□□ -2.16
PDE4D-218ENST00000509368 RSL24D1Q9UHA3 163 aaKnown RBP1.55□□□□□ -2.16
PDE4D-218ENST00000509368 ZFP30Q9Y2G7 519 aa1.55□□□□□ -2.16
PDE4D-218ENST00000509368 COL27A1Q8IZC6 1860 aaPredicted RBP1.55□□□□□ -2.16
PDE4D-218ENST00000509368 ANKRD17O75179 2603 aaKnown RBP1.55□□□□□ -2.16
PDE4D-218ENST00000509368 HECTD1Q9ULT8 2610 aa1.55□□□□□ -2.16
PDE4D-218ENST00000509368 USP9XQ93008 2570 aaPredicted RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ZNF106Q9H2Y7 1883 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 IGKV1-27A0A075B6S5 117 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 A0A087WUJ7 227 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SMIM26A0A096LP01 95 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 A0A0J9YY10 115 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 EXOC1LA0A1B0GW35 172 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 A0A1B0GX78 115 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 OR5H14A6NHG9 310 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 KLLNB2CW77 178 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 F5H5T6 163 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TNFSF13O75888 250 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GAS8-AS1O95177 125 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 CNIH1O95406 144 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 OR56A5P0C7T3 313 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ZBTB25P24278 435 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DRD3P35462 400 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MARCKSL1P49006 195 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 H2BFSP57053 126 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SNRPFP62306 86 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GNA12Q03113 381 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ZNF616Q08AN1 781 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ADIGQ0VDE8 80 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 LRRC75BQ2VPJ9 315 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SCGB2B2Q4G0G5 96 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TSPO2Q5TGU0 170 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ZNF429Q86V71 674 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SLC25A45Q8N413 288 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DCAF4L2Q8NA75 395 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GNPDA2Q8TDQ7 276 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MBD3L1Q8WWY6 194 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SLC7A6Q92536 515 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DCUN1D4Q92564 292 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM106AQ96A25 262 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SLC35G5Q96KT7 338 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GPR82Q96P67 336 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MARVELD1Q9BSK0 173 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 CHCHD7Q9BUK0 85 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 CHST6Q9GZX3 395 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GFRA4Q9GZZ7 299 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MS4A6AQ9H2W1 248 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 FBXL15Q9H469 300 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 NOX3Q9HBY0 568 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 HES4Q9HCC6 221 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ACER3Q9NUN7 267 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SCN3BQ9NY72 215 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GNG8Q9UK08 70 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ZNF223Q9UK11 482 aaPredicted RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 INSIG2Q9Y5U4 225 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ATG2BQ96BY7 2078 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 ASCC3Q8N3C0 2202 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 NUP210LQ5VU65 1888 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DOCK6Q96HP0 2047 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 IGHV3-72A0A0B4J1Y9 119 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TRAV38-1A0A0B4J264 116 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 A0A1B0GVX0 72 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM72A0PK05 275 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM150BA6NC51 233 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MAP1LC3B2A6NCE7 125 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 PIRO00625 290 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DEGS1O15121 323 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 NCR2O95944 276 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 APODP05090 189 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 HLA-DQB2P05538 268 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SCTP09683 121 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MIPP30301 263 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GZMMP51124 257 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TCL1AP56279 114 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 CLDN12P56749 244 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 PPP1CAP62136 330 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 EIF3IQ13347 325 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SURF2Q15527 256 aaPredicted RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 SSX1Q16384 188 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 PABPC1L2AQ5JQF8 200 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 NANOGP8Q6NSW7 305 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 FBXL22Q6P050 247 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TEX261Q6UWH6 196 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DGAT2L6Q6ZPD8 337 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 OR5A2Q8NGI9 324 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 OR1J4Q8NGS1 313 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 OR5J2Q8NH18 312 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 OR5K1Q8NHB7 308 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 GPR146Q96CH1 333 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 MAP1LC3BQ9GZQ8 125 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 LHX9Q9NQ69 397 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 CISHQ9NSE2 258 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 RBFOX1Q9NWB1 397 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 IDI2-AS1Q9NZ38 188 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM216Q9P0N5 145 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 DEC1Q9P2X7 70 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 METTL1Q9UBP6 276 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 KIF25-AS1Q9Y6Z4 181 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms