RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 DEFB114Q30KQ6 69 aa14.13□□□□□ -0.15
UBE3D-207ENST00000509102 SPSB3Q6PJ21 355 aa14.13□□□□□ -0.15
UBE3D-207ENST00000509102 MARC2Q969Z3 335 aa14.13□□□□□ -0.15
UBE3D-207ENST00000509102 BSCL2Q96G97 398 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-207ENST00000509102 ATP6V0BQ99437 205 aa14.13□□□□□ -0.15
UBE3D-207ENST00000509102 ZC4H2Q9NQZ6 224 aa14.13□□□□□ -0.15
UBE3D-207ENST00000509102 GAR1Q9NY12 217 aaKnown RBP14.13□□□□□ -0.15
UBE3D-207ENST00000509102 C3orf85A0A1B0GTC6 90 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 IZUMO1RA6ND01 250 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 TGOLN2O43493 480 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 TRIM16LQ309B1 348 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 ZNF57Q68EA5 555 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-207ENST00000509102 OR1P1Q8NH06 330 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 RNASE11Q8TAA1 199 aaKnown RBP14.12□□□□□ -0.15
UBE3D-207ENST00000509102 DYNC2LI1Q8TCX1 351 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 SMIM4Q8WVI0 70 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 PDCD10Q9BUL8 212 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 PLEKHA3Q9HB20 300 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 C19orf73Q9NVV2 129 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 C21orf62Q9NYP8 219 aa14.12□□□□□ -0.15
UBE3D-207ENST00000509102 C14orf166Q9Y224 244 aaKnown RBP14.12□□□□□ -0.15
UBE3D-207ENST00000509102 OR2T8A6NH00 312 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
UBE3D-207ENST00000509102 HSPE1P61604 102 aaKnown RBP14.11□□□□□ -0.15
UBE3D-207ENST00000509102 ERHP84090 104 aaKnown RBP14.11□□□□□ -0.15
UBE3D-207ENST00000509102 PRCDQ00LT1 54 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 ADAMTSL5Q6ZMM2 481 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 SLC16A13Q7RTY0 426 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 UBAC2Q8NBM4 344 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 OR4D10Q8NGI6 311 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 OR13C8Q8NGS7 320 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 NEURL2Q9BR09 285 aa14.11□□□□□ -0.15
UBE3D-207ENST00000509102 THAP7Q9BT49 309 aaPredicted RBP14.11□□□□□ -0.15
UBE3D-207ENST00000509102 RSL24D1Q9UHA3 163 aaKnown RBP14.11□□□□□ -0.15
UBE3D-207ENST00000509102 TMEM213A2RRL7 107 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 CTDSPLO15194 276 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 CTSDP07339 412 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-207ENST00000509102 AKAIN1P0CW23 69 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 ANKRD55Q3KP44 614 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 Q56UQ5 140 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 UXS1Q8NBZ7 420 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 MARCH1Q8TCQ1 289 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 CACNG8Q8WXS5 425 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 RRNAD1Q96FB5 475 aaKnown RBP14.1□□□□□ -0.15
UBE3D-207ENST00000509102 TP53RKQ96S44 253 aa14.1□□□□□ -0.15
UBE3D-207ENST00000509102 MRPL27Q9P0M9 148 aaKnown RBP14.1□□□□□ -0.15
UBE3D-207ENST00000509102 IGHV3-35A0A0C4DH35 117 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 DBX1A6NMT0 343 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 SURF2Q15527 256 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-207ENST00000509102 RBPMS2Q6ZRY4 209 aaKnown RBP14.09□□□□□ -0.15
UBE3D-207ENST00000509102 OR2C3Q8N628 320 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 SLC35G3Q8N808 338 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 SCARB1Q8WTV0 552 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 MISP3Q96FF7 219 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 PRRT1Q99946 306 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 SPATA25Q9BR10 227 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 STAB2Q8WWQ8 2551 aa14.09□□□□□ -0.15
UBE3D-207ENST00000509102 IGHV3-21A0A0B4J1V1 117 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 TEX13DA0A0J9YY54 714 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-207ENST00000509102 H3BMQ9 156 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 IFNA17P01571 189 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 SNCAP37840 140 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 TM4SF20Q53R12 229 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 UNQ9165/PRO28630Q6UXU0 137 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 ISOC1Q96CN7 298 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 WDR89Q96FK6 387 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-207ENST00000509102 TM2D3Q9BRN9 247 aa14.08□□□□□ -0.16
UBE3D-207ENST00000509102 ZNF436Q9C0F3 470 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-207ENST00000509102 DAZ1Q9NQZ3 744 aaKnown RBP14.08□□□□□ -0.16
UBE3D-207ENST00000509102 TRAV25A0A0B4J276 109 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 CCDC160A6NGH7 325 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 ZNF785A8K8V0 405 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 C3orf84H3BNL1 204 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 K7EIM0 57 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 NDUFA4O00483 81 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 NUPL2O15504 423 aaKnown RBP14.07□□□□□ -0.16
UBE3D-207ENST00000509102 EDN2P20800 178 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 SUB1P53999 127 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBE3D-207ENST00000509102 MFAP2P55001 183 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 RELQ04864 619 aaPredicted RBP14.07□□□□□ -0.16
UBE3D-207ENST00000509102 FAAP20Q6NZ36 180 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 BTNL8Q6UX41 500 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 ZNF114Q8NC26 417 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 OR52B4Q8NGK2 314 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 MCFD2Q8NI22 146 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 TMEM190Q8WZ59 177 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 ENY2Q9NPA8 101 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 MLXQ9UH92 298 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 SCP2D1Q9UJQ7 156 aa14.07□□□□□ -0.16
UBE3D-207ENST00000509102 FABP12A6NFH5 140 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 OR11H12B2RN74 326 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 IGKV1-5P01602 117 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 UCP1P25874 307 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 MFAP4P55083 255 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 SP6Q3SY56 376 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 TMEM61Q8N0U2 210 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 OR4C16Q8NGL9 310 aa14.06□□□□□ -0.16
UBE3D-207ENST00000509102 SCGB3A2Q96PL1 93 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms