RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CORTO00230 105 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 RNASE1P07998 156 aaKnown RBP8.21□□□□□ -1.1
RFC1-211ENST00000509084 OR8U8P0C7N1 319 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 RPL12P30050 165 aaKnown RBP8.21□□□□□ -1.1
RFC1-211ENST00000509084 EIF2B2P49770 351 aaKnown RBP8.21□□□□□ -1.1
RFC1-211ENST00000509084 PAX9P55771 341 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 HBG1P69891 147 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 HBG2P69892 147 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 NDPQ00604 133 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 SPANXN5Q5MJ07 72 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 OR11H4Q8NGC9 324 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 PRSS22Q9GZN4 317 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 MFFQ9GZY8 342 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 PARP11Q9NR21 331 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 TNFRSF19Q9NS68 423 aa8.21□□□□□ -1.1
RFC1-211ENST00000509084 MAP1AP78559 2803 aaPredicted RBP8.21□□□□□ -1.1
RFC1-211ENST00000509084 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 A0A1B0GW64 132 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 RNF222A6NCQ9 220 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 FAM24AA6NFZ4 105 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 NPIPB5A8MRT5 1133 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 E7EUB6 86 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 H3BP45 60 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 BOLA2-SMG1P6H3BVE0 249 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 ATP6V0E1O15342 81 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 TMEM50AO95807 157 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 IGF1P05019 195 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 OR13C7P0DN81 318 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 HKR1P10072 659 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 SULT1A1P50225 295 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 EWSR1Q01844 656 aaKnown RBP eCLIP8.2□□□□□ -1.1
RFC1-211ENST00000509084 WT1-ASQ06250 92 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 AKIRIN2Q53H80 203 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
RFC1-211ENST00000509084 C9orf152Q5JTZ5 239 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 TMEM14EPQ6UXP3 125 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
RFC1-211ENST00000509084 STPG2Q8N412 459 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 OR10W1Q8NGF6 305 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 OR1P1Q8NH06 330 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
RFC1-211ENST00000509084 GON7Q9BXV9 100 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 HSPB11Q9Y547 144 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 CSMD1Q96PZ7 3565 aa8.2□□□□□ -1.1
RFC1-211ENST00000509084 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 KANTRA0A1W2PQU2 76 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 IGSF23A1L1A6 192 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 TAAR5O14804 337 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 TCF21O43680 179 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 IFNA4P05014 189 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 CRYBA1P05813 215 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 CRYGCP07315 174 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 DEFA4P12838 97 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 CTRB1P17538 263 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 EXOSC2Q13868 293 aaKnown RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 CTRB2Q6GPI1 263 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 UNQ5815/PRO19632Q6UWF5 114 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 KCNRGQ8N5I3 272 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 TTC9CQ8N5M4 171 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 FAM110DQ8TAY7 271 aaPredicted RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 RNASEH2CQ8TDP1 164 aaKnown RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 OR4C12Q96R67 309 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 FAM103A1Q9BTL3 118 aaKnown RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 PAIP2BQ9ULR5 123 aaKnown RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 F11RQ9Y624 299 aaKnown RBP8.19□□□□□ -1.1
RFC1-211ENST00000509084 CSPG4Q6UVK1 2322 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 NAV3Q8IVL0 2385 aa8.19□□□□□ -1.1
RFC1-211ENST00000509084 TRAV41A0A0B4J266 112 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 RPS10-NUDT3A0A1W2PQS6 291 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 H3BUA1 57 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 FBXO24O75426 580 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 DFFBO76075 338 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 METTL15P1P0C7V9 234 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 AREGP15514 252 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 HIST1H1BP16401 226 aaKnown RBP8.18□□□□□ -1.1
RFC1-211ENST00000509084 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
RFC1-211ENST00000509084 S100A11P31949 105 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 AP2S1P53680 142 aaPredicted RBP8.18□□□□□ -1.1
RFC1-211ENST00000509084 BLCAPP62952 87 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 UBA52P62987 128 aaKnown RBP8.18□□□□□ -1.1
RFC1-211ENST00000509084 ATP6V1FQ16864 119 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 ECSCRQ19T08 205 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 ETFRF1Q6IPR1 90 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 ETV3LQ6ZN32 361 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 Q8N2B8 174 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 LILRB2Q8N423 598 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 C9orf62Q8N4C0 152 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 LFNGQ8NES3 379 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 OR1S2Q8NGQ3 325 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 DUX5Q96PT3 197 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 P2RX4Q99571 388 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 GGACTQ9BVM4 153 aa8.18□□□□□ -1.1
RFC1-211ENST00000509084 ARL6Q9H0F7 186 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms