RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZPLD1Q8TCW7 415 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 BAALCQ8WXS3 180 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 PIGCQ92535 297 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 RAB37Q96AX2 223 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 LINC00479Q96M42 142 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 RASL11BQ9BPW5 248 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 ULBP3Q9BZM4 244 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 TECRQ9NZ01 308 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 HILPDAQ9Y5L2 63 aa8.93□□□□□ -0.98
PDLIM5-210ENST00000508216 TRBV20OR9-2A0A075B6H5 130 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 A0A1B0GTH9 108 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 TNFSF11O14788 317 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 PAGE4O60829 102 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 NDUFA7O95182 113 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 DAP3P51398 398 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 TESK1Q15569 626 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 TAL2Q16559 108 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 ABCA11PQ4W5N1 156 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 HOXB13Q92826 284 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 NKD1Q969G9 470 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 NUS1Q96E22 293 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 C1orf147Q96MC9 270 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 TMEM59Q9BXS4 323 aa8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 DNAJB12Q9NXW2 375 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-210ENST00000508216 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 MBD3L4A6NDZ8 208 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 MBD3L3A6NE82 208 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 OTOL1A6NHN0 477 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 MBD3L5A6NJ08 208 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 SRSF10O75494 262 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 NAPSAO96009 420 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 HOXD9P28356 352 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 NMUP48645 174 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 MRPS6P82932 125 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 HES1Q14469 280 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 SIGLEC15Q6ZMC9 328 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 ANKRD37Q7Z713 158 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 KIR3DL3Q8N743 410 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 OR1L8Q8NGR8 309 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 TAF15Q92804 592 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 TMEM222Q9H0R3 208 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 LTBP1Q14766 1721 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 TRAV24A0A0B4J272 114 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 A0A1B0GVT2 93 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 ZNF840PA6NDX5 716 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 M0R2P5 195 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 ZG16O60844 167 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 CLDN7O95471 211 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 HLA-DRB4P13762 266 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 HMGA1P17096 107 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 ARFRP1Q13795 201 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 TBC1D28Q2M2D7 210 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 NFE4Q86UQ8 179 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 OCC1Q8TAD7 63 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 ZNF689Q96CS4 500 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 SRSF8Q9BRL6 282 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 FAM60AQ9NP50 221 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 IDI2-AS1Q9NZ38 188 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 HLA-DRB4X5D2U9 266 aa8.91□□□□□ -0.98
PDLIM5-210ENST00000508216 COL4A3Q01955 1670 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 TRPM6Q9BX84 2022 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 DUSP14O95147 198 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 NDUFB4O95168 129 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 IGKV1D-33P01593 117 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 IGKV1-33P01594 117 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 ARL16Q0P5N6 197 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 SLC48A1Q6P1K1 146 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 KCTD18Q6PI47 426 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 PROCRQ9UNN8 238 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 KLF12Q9Y4X4 402 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 V9GYY9 64 aa8.9□□□□□ -0.98
PDLIM5-210ENST00000508216 TRBV20-1A0A075B6N2 111 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 TEX50A0A1B0GTY4 177 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 A0A1W2PR77 199 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 PLPP1O14494 284 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 SPRY1O43609 319 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 PPYP01298 95 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 CRYAAP02489 173 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 BGLAPP02818 100 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 HLA-DOBP13765 273 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 C3AR1Q16581 482 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 SLC37A2Q8TED4 501 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 LOC107986453A0A1B0GWG9 222 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 C2CD4DB7Z1M9 353 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 TIMM8AO60220 97 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 EML2O95834 649 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 COX5AP20674 150 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 LYSMD4Q5XG99 296 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 ATP5L2Q7Z4Y8 100 aa8.89□□□□□ -0.99
PDLIM5-210ENST00000508216 TMEM86AQ8N2M4 240 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms