RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 LRPPRCP42704 1394 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 AFDNP55196 1824 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 MAP3K19Q56UN5 1328 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 TRBV30A0A0K0K1B3 111 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 NUPR2A6NF83 97 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CCDC160A6NGH7 325 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 GGT3PA6NGU5 568 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 METTL15A6NJ78 407 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 LST1O00453 97 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 SNAP29O95721 258 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 TCL1BO95988 128 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 STAG3L3P0CL85 134 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CRYGAP11844 174 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 COX6A1P12074 109 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 SPI1P17947 270 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CFL1P23528 166 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CD40LGP29965 261 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 MIPP30301 263 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 DEKP35659 375 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 PSMD7P51665 324 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 HPCAP84074 193 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 ESPL1Q14674 2120 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 EBPQ15125 230 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 VAMP3Q15836 100 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 DEFB113Q30KQ7 82 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 HAGHLQ6PII5 290 aaPredicted RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 TMCO2Q7Z6W1 182 aaPredicted RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 SPERTQ8NA61 448 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 OR52E4Q8NGH9 312 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 OR10D3Q8NH80 312 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 DYNC2LI1Q8TCX1 351 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 PSMF1Q92530 271 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 LRRC45Q96CN5 670 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 SMIM12Q96EX1 92 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 TMEM56Q96MV1 263 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 ERMAPQ96PL5 475 aaPredicted RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 LYSMD1Q96S90 227 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 TMEM109Q9BVC6 243 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 BBS2Q9BXC9 721 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 SLC22A4Q9H015 551 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 METTL9Q9H1A3 318 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 MIXL1Q9H2W2 232 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 WDR54Q9H977 334 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 HRASLSQ9HDD0 168 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CHRAC1Q9NRG0 131 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 PARVAQ9NVD7 372 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 IL36BQ9NZH7 164 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CKLFQ9UBR5 152 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 NXT1Q9UKK6 140 aaKnown RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 TNFSF18Q9UNG2 199 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 FUT9Q9Y231 359 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 HS3ST2Q9Y278 367 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 HDGFL3Q9Y3E1 203 aa-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.54□□□□□ -2.5
CLOCK-207ENST00000508049 RIMS2Q9UQ26 1411 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 UBR2Q8IWV8 1755 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 A0A1W2PP64 1363 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 TMEM94Q12767 1356 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 BSNQ9UPA5 3926 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 IGLV3-32A0A0A0MS00 114 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 C1orf232A0A0U1RR37 186 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 C5orf49A4QMS7 147 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 FABP5P3A8MUU1 101 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 I3L521 148 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 LIN7AO14910 233 aaPredicted RBP-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 SGCEO43556 437 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 MBP02144 154 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 REG1AP05451 166 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 LINC00614P0C842 121 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 NQO2P16083 231 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 S100A7P31151 101 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 EIF2B2P49770 351 aaKnown RBP-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 DLX6P56179 175 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 TNFAIP6P98066 277 aaPredicted RBP-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 JOSD1Q15040 202 aaPredicted RBP-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 CLEC12BQ2HXU8 276 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 NKAIN1Q4KMZ8 207 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 RNASE10Q5GAN6 216 aaKnown RBP-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 FAM74A1Q5RGS3 127 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 ANGPTL5Q86XS5 388 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 TBC1D19Q8N5T2 526 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 OR5B17Q8NGF7 314 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 HAVCR2Q8TDQ0 301 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 RASSF5Q8WWW0 418 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 IFT81Q8WYA0 676 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 KIAA1143Q96AT1 154 aaPredicted RBP-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 CATSPER2Q96P56 530 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 PSTPIP2Q9H939 334 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 GPR84Q9NQS5 396 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 AK3Q9UIJ7 227 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 COQ4Q9Y3A0 265 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 COL24A1Q17RW2 1714 aa-0.55□□□□□ -2.5
CLOCK-207ENST00000508049 MYO5AQ9Y4I1 1855 aaKnown RBP-0.56□□□□□ -2.5
CLOCK-207ENST00000508049 A0A0D9SG52 128 aa-0.56□□□□□ -2.5
CLOCK-207ENST00000508049 TEX50A0A1B0GTY4 177 aa-0.56□□□□□ -2.5
CLOCK-207ENST00000508049 SMIM9A6NGZ8 99 aa-0.56□□□□□ -2.5
CLOCK-207ENST00000508049 ZNF879B4DU55 563 aa-0.56□□□□□ -2.5
CLOCK-207ENST00000508049 ACOX3O15254 700 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms