RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 VKORC1L1Q8N0U8 176 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 WFDC9Q8NEX5 89 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 NOL4LQ96MY1 436 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-205ENST00000506880 GPHA2Q96T91 129 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 RANGRFQ9HD47 186 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-205ENST00000506880 CACNG5Q9UF02 275 aa6.6□□□□□ -1.35
PDGFC-205ENST00000506880 IGLV11-55A0A075B6I3 123 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 FNDC10F2Z333 226 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 INMT-MINDY4F8WBC2 141 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 I3L521 148 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 ST8SIA3O43173 380 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 TRGV3P03979 118 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 HSPB1P04792 205 aaKnown RBP6.59□□□□□ -1.35
PDGFC-205ENST00000506880 PF4V1P10720 104 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 SLC25A4P12235 298 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 TPPP2P59282 170 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 ATP5G2Q06055 141 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 RGS21Q2M5E4 152 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 TMEM95Q3KNT9 176 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 SP6Q3SY56 376 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 C2orf83Q53S99 150 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 NRARPQ7Z6K4 114 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 C12orf45Q8N5I9 185 aaPredicted RBP6.59□□□□□ -1.35
PDGFC-205ENST00000506880 LHFPL5Q8TAF8 219 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 CACNG8Q8WXS5 425 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 EEF1AKMT3Q96AZ1 226 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 GPR146Q96CH1 333 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 RCC1LQ96I51 464 aaKnown RBP6.59□□□□□ -1.35
PDGFC-205ENST00000506880 RAB40CQ96S21 281 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 CITED2Q99967 270 aaPredicted RBP6.59□□□□□ -1.35
PDGFC-205ENST00000506880 FBXO7Q9Y3I1 522 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 WSB1Q9Y6I7 421 aa6.59□□□□□ -1.35
PDGFC-205ENST00000506880 TRAV30A0A087WSZ9 112 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.58□□□□□ -1.36
PDGFC-205ENST00000506880 C7orf66A4D0T2 115 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 LINC01548A6NM66 108 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 ADARB2-AS1A8MUL3 147 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 G3V318 75 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 WIPF1O43516 503 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 SOX15O60248 233 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 PET100P0DJ07 73 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 OR13C7P0DN81 318 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 CD28P10747 220 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 RHOGP84095 191 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 SRSF2Q01130 221 aaKnown RBP6.58□□□□□ -1.36
PDGFC-205ENST00000506880 IFITM3Q01628 133 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 ID3Q02535 119 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 ZNF616Q08AN1 781 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 KIAA0141Q14154 515 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-205ENST00000506880 ANKRD55Q3KP44 614 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 TCTEX1D4Q5JR98 221 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 LYZL2Q7Z4W2 148 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 ZNF329Q86UD4 541 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 OR1S1Q8NH92 325 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 BSCL2Q96G97 398 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-205ENST00000506880 P2RX4Q99571 388 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 SIGLEC8Q9NYZ4 499 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 SORL1Q92673 2214 aa6.58□□□□□ -1.36
PDGFC-205ENST00000506880 TRAV3A0A0B4J244 114 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 LINC00854A0A1B0GVQ3 168 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 NUDT19A8MXV4 375 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 LINC01619G3V211 115 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 CCL24O00175 119 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 SYNGR2O43760 224 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 PF4P02776 101 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 CD5P06127 495 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 ANXA7P20073 488 aaKnown RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 PVALBP20472 110 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 S100A7P31151 101 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 GPX4P36969 197 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 NKX2-1P43699 371 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 NPBWR1P48145 328 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 HOXA1P49639 335 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 ELLP55199 621 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 RAB11AP62491 216 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 GGNBP1Q5YKI7 109 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 GSG1LQ6UXU4 331 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 KLHL30-AS1Q8NEE0 82 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 DTD1Q8TEA8 209 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 CASTOR1Q8WTX7 329 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 DCUN1D4Q92564 292 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 DPF1Q92782 380 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 C2orf50Q96LR7 162 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 FAM103A1Q9BTL3 118 aaKnown RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 NMES1Q9C002 83 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 ZNF355PQ9NSJ1 428 aa6.57□□□□□ -1.36
PDGFC-205ENST00000506880 PEF1Q9UBV8 284 aaKnown RBP6.57□□□□□ -1.36
PDGFC-205ENST00000506880 TRAV6A0A075B6T7 132 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 A0A1B0GW64 132 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 SH2D7A6NKC9 451 aaPredicted RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 CEBPZOSA8MTT3 80 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 E7EUB6 86 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 LGALS9O00182 355 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 WRBO00258 174 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 TSC22D2O75157 780 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms