RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ANGP03950 147 aaKnown RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BOP23527 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HLA-DMBP28068 263 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BBP33778 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 EVX1P49640 407 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BDP58876 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 LSM6P62312 80 aaKnown RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BCP62807 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 SLC38A11Q08AI6 406 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 STX5Q13190 355 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 SRSF6Q13247 344 aaKnown RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST2H2BEQ16778 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 IAH1Q2TAA2 248 aaPredicted RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 TMEM97Q5BJF2 176 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 SPANXN3Q5MJ09 141 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 LRRC28Q86X40 367 aaPredicted RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 OR6V1Q8N148 313 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 RASSF5Q8WWW0 418 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 C11orf40Q8WZ69 217 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BHQ93079 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 PPP1R2P1Q96PQ5 205 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BNQ99877 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 HIST1H2BMQ99879 126 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 NIPSNAP1Q9BPW8 284 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 TRIM4Q9C037 500 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 C20orf27Q9GZN8 174 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 FBXL12Q9NXK8 326 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 MRPL27Q9P0M9 148 aaKnown RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 TIMM22Q9Y584 194 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 TMEM56-RWDD3S4R434 201 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 FLT4P35916 1363 aa0.78□□□□□ -2.28
GYPB-207ENST00000506679 SCAF11Q99590 1463 aaKnown RBP0.78□□□□□ -2.28
GYPB-207ENST00000506679 COL6A3P12111 3177 aa0.78□□□□□ -2.29
GYPB-207ENST00000506679 NUMA1Q14980 2115 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 COL6A6A6NMZ7 2263 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 MACF1Q9UPN3 7388 aaKnown RBP0.77□□□□□ -2.29
GYPB-207ENST00000506679 A0A0D9SEW6 157 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 A0A1B0GVG6 124 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 OR4C46A6NHA9 309 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 LYPLA2O95372 231 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 CRYZL1O95825 349 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 PPBPP02775 128 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 TCRBP04435 133 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 CTXN2P0C2S0 81 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 AKR1C3P42330 323 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 RPL5P46777 297 aaKnown RBP0.77□□□□□ -2.29
GYPB-207ENST00000506679 ZNF80P51504 273 aaPredicted RBP0.77□□□□□ -2.29
GYPB-207ENST00000506679 AP3S2P59780 193 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 RANP62826 216 aaKnown RBP0.77□□□□□ -2.29
GYPB-207ENST00000506679 HBA1P69905 142 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 AADACL3Q5VUY0 350 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 SLC36A1Q7Z2H8 476 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 RPS19BP1Q86WX3 136 aaKnown RBP0.77□□□□□ -2.29
GYPB-207ENST00000506679 ANKRD29Q8N6D5 301 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 OR2T4Q8NH00 348 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 ZNF563Q8TA94 476 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 MBD3L1Q8WWY6 194 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 TOMM6Q96B49 74 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 CHMP6Q96FZ7 201 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 BTF3L4Q96K17 158 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 TSPAN32Q96QS1 320 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 DERL1Q9BUN8 251 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 OR8D2Q9GZM6 311 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 DCSTAMPQ9H295 470 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 CST9LQ9H4G1 147 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 CISHQ9NSE2 258 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 GLTPQ9NZD2 209 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 FBXO5Q9UKT4 447 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 MTUS2Q5JR59 1369 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 WRNQ14191 1432 aaPredicted RBP eCLIP0.77□□□□□ -2.29
GYPB-207ENST00000506679 SMARCA4P51532 1647 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 HEATR5AQ86XA9 2040 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 CCDC88CQ9P219 2028 aa0.77□□□□□ -2.29
GYPB-207ENST00000506679 MYH11P35749 1972 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 RTL1A6NKG5 1358 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TRGV2A0A075B6R0 118 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TRAV9-1A0A075B6T8 112 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 A0A087WUJ7 227 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 IGKV1D-43A0A0B4J1Z2 117 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TRAV26-2A0A0B4J265 109 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 EXOC1LA0A1B0GW35 172 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 DPRXA6NFQ7 191 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 SMIM9A6NGZ8 99 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 C19orf84I3L1E1 186 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 J3QRK9 145 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 FAAHO00519 579 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 SDCBPO00560 298 aaPredicted RBP0.76□□□□□ -2.29
GYPB-207ENST00000506679 PIRO00625 290 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 FADS1O60427 444 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 ZNF737O75373 536 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 PGLYRP1O75594 196 aaPredicted RBP0.76□□□□□ -2.29
GYPB-207ENST00000506679 CIAO1O76071 339 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 HAND1O96004 215 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 RBP1P09455 135 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 TRGC1P0CF51 173 aa0.76□□□□□ -2.29
GYPB-207ENST00000506679 RPS4Y1P22090 263 aaKnown RBP0.76□□□□□ -2.29
GYPB-207ENST00000506679 MRPS25P82663 173 aaKnown RBP0.76□□□□□ -2.29
GYPB-207ENST00000506679 MRPS15P82914 257 aaKnown RBP0.76□□□□□ -2.29
GYPB-207ENST00000506679 REEP5Q00765 189 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms