RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HAGHQ16775 308 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 FAM106AQ4KMX7 169 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 RNASE10Q5GAN6 216 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 UNQ9165/PRO28630Q6UXU0 137 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 ARRDC1Q8N5I2 433 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 MUC7Q8TAX7 377 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 CACNG8Q8WXS5 425 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 ZNF486Q96H40 463 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 ATP6V0BQ99437 205 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 TSC22D3Q99576 134 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 EXTL2Q9UBQ6 330 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 OR51B2Q9Y5P1 312 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 K7EIM0 57 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 CYB5BO43169 146 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 TGOLN2O43493 480 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 SNAPC5O75971 98 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 P0C879 139 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 ELLP55199 621 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 CD81P60033 236 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 RNASE12Q5GAN4 147 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 SLC25A24Q6NUK1 477 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 GPR141Q7Z602 305 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 TMEM61Q8N0U2 210 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 UXS1Q8NBZ7 420 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 OR4D10Q8NGI6 311 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 C15orf40Q8WUR7 153 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 TMEM190Q8WZ59 177 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 MARC2Q969Z3 335 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 ZNF414Q96IQ9 312 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 TMEM56Q96MV1 263 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 NEURL2Q9BR09 285 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 FKBP11Q9NYL4 201 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 MLXQ9UH92 298 aa6.82□□□□□ -1.32
PDLIM5-209ENST00000506632 ZNF320A2RRD8 509 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 GABARAPH6UMI1 98 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 CTDSP2O14595 271 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 IFNA6P05013 189 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 ADMP35318 185 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 PRCDQ00LT1 54 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 SSBP1Q04837 148 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 ZNF57Q68EA5 555 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 SPSB3Q6PJ21 355 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 PLET1Q6UQ28 207 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 OR2C3Q8N628 320 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 TMEM229BQ8NBD8 167 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 ZNF114Q8NC26 417 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 OR1L6Q8NGR2 347 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 OR1P1Q8NH06 330 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 DYNC2LI1Q8TCX1 351 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 SCARB1Q8WTV0 552 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 MRGPRFQ96AM1 343 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 BSCL2Q96G97 398 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 TP53RKQ96S44 253 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 BCL7BQ9BQE9 202 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 CHRDL1Q9BU40 450 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 HINT2Q9BX68 163 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 WFDC10AQ9H1F0 79 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 PLEKHA3Q9HB20 300 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 PALMDQ9NP74 551 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 SLC2A8Q9NY64 477 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
PDLIM5-209ENST00000506632 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 TRAV25A0A0B4J276 109 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 IGHV3-35A0A0C4DH35 117 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 OR2T8A6NH00 312 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 OR11H12B2RN74 326 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 INS-IGF2F8WCM5 200 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 RBMY1DP0C7P1 496 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 PGAM2P15259 253 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 PI3P19957 117 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 FCGR2BP31994 310 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 TMBIM6P55061 237 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 PIGPP57054 158 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 TAS2R19P59542 299 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 HSPE1P61604 102 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 MRPS10P82664 201 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 GUCA2BQ16661 112 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 BTNL8Q6UX41 500 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 H2BFWTQ7Z2G1 175 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 CLVS1Q8IUQ0 354 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 DEFB125Q8N687 156 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 OR4A16Q8NH70 328 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 TERB2Q8NHR7 220 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 RAB2BQ8WUD1 216 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 SMIM4Q8WVI0 70 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 HIPK2Q9H2X6 1198 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 CCDC59Q9P031 241 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 MRPL27Q9P0M9 148 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 UFC1Q9Y3C8 167 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 CEPT1Q9Y6K0 416 aa6.8□□□□□ -1.32
PDLIM5-209ENST00000506632 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms