RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 C14orf166Q9Y224 244 aaKnown RBP1.91□□□□□ -2.1
TRAPPC11-205ENST00000506426 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.91□□□□□ -2.16e-6■■■■□ 22.9
TRAPPC11-205ENST00000506426 TRRAPQ9Y4A5 3859 aa1.9□□□□□ -2.1
TRAPPC11-205ENST00000506426 IGLV3-32A0A0A0MS00 114 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 TRAV8-3A0A0A6YYJ7 113 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 TRAV8-2A0A0B4J237 113 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 GMNCA6NCL1 334 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 LRCOL1A6NCL2 159 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 FAM183AA6NL82 134 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 COLCA2A8K830 154 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 LYNX1G3V0Z9 82 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 H3BP45 60 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 ITGB1BP1O14713 200 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 PHYHO14832 338 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 MPZL2O60487 215 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 SHBGP04278 402 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 LINC00032P0C843 101 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 LYNX1P0DP58 116 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 SPNP16150 400 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 AKR1C4P17516 323 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 AZU1P20160 251 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 PVALBP20472 110 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 SLC6A1P30531 599 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 UBE2G2P60604 165 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 CAV1Q03135 178 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 SKP2Q13309 424 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 MAPK14Q16539 360 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 NOXRED1Q6NXP6 359 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 TNFAIP8L2Q6P589 184 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 CASP12Q6UXS9 341 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZCCHC23Q6ZST2 131 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 CLECL1Q8IZS7 167 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 C4orf33Q8N1A6 199 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 MUC15Q8N387 334 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 MMGT1Q8N4V1 131 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 MNS1Q8NEH6 495 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 GPR119Q8TDV5 335 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 C10orf105Q8TEF2 133 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 TWIST2Q8WVJ9 160 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 PPCDCQ96CD2 204 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 ARL5BQ96KC2 179 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 DCUN1D5Q9BTE7 237 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 BPESC1Q9GZL8 116 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 RHOFQ9HBH0 211 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 LRTM1Q9HBL6 345 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF706Q9Y5V0 76 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 YLPM1P49750 1951 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 RTTNQ86VV8 2226 aa1.9□□□□□ -2.11
TRAPPC11-205ENST00000506426 ABCA1O95477 2261 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 PRR14LQ5THK1 2151 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV2-26A0A0B4J1V2 119 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 FABP12A6NFH5 140 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 EFCAB9A8MZ26 197 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 RPL36A-HNRNPH2H7BZ11 118 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 J3QLI3 93 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 LGALS9O00182 355 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 MFNGO00587 321 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 AZIN1O14977 448 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 SYNGR1O43759 233 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 RBBP9O75884 186 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 CA2P00918 260 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 NRASP01111 189 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 HRASP01112 189 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 KRASP01116 189 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 IGHV1-46P01743 117 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR5AC1P0C628 307 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 SLC25A16P16260 332 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 PYCR1P32322 319 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 SRP14P37108 136 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 IDH2P48735 452 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 TGM4P49221 684 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 SERPINB9P50453 376 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 EFNA4P52798 201 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 DLX6P56179 175 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 SNRPD2P62316 118 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 ACTG1P63261 375 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 PSPHP78330 225 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 HOXC5Q00444 222 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 TIMM23BQ5SRD1 257 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 MRPL2Q5T653 305 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 FAM162BQ5T6X4 162 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 NXNL2Q5VZ03 156 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 C3orf33Q6P1S2 294 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 FUNDC1Q8IVP5 155 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF709Q8N972 641 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 LFNGQ8NES3 379 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 ZNF563Q8TA94 476 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 DTD1Q8TEA8 209 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 RAB8BQ92930 207 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 MUCL1Q96DR8 90 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 SLC35G5Q96KT7 338 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 TMEM56Q96MV1 263 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 FAM210AQ96ND0 272 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 OR7D2Q96RA2 312 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 LINC01587Q99440 93 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 DHRS9Q9BPW9 319 aa1.89□□□□□ -2.11
TRAPPC11-205ENST00000506426 PLA2G12AQ9BZM1 189 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms