RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 RPL27AP46776 148 aaKnown RBP4.93□□□□□ -1.62
VCAN-206ENST00000505615 NPBWR1P48145 328 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 CMC4P56277 68 aaPredicted RBP4.93□□□□□ -1.62
VCAN-206ENST00000505615 LEMD1Q68G75 181 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 PLET1Q6UQ28 207 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 TRPT1Q86TN4 253 aaKnown RBP4.93□□□□□ -1.62
VCAN-206ENST00000505615 CENPSQ8N2Z9 138 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 JAGN1Q8N5M9 183 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 ZNRF2Q8NHG8 242 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 OSR1Q8TAX0 266 aaPredicted RBP4.93□□□□□ -1.62
VCAN-206ENST00000505615 FRZBQ92765 325 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 CXorf58Q96LI9 332 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 NEDD4LQ96PU5 975 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 GPHA2Q96T91 129 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 CIB1Q99828 191 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 GABARAPL3Q9BY60 117 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 YTHDF1Q9BYJ9 559 aaKnown RBP4.93□□□□□ -1.62
VCAN-206ENST00000505615 GABARAPL1Q9H0R8 117 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 OR2D2Q9H210 308 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 TMEM231Q9H6L2 316 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 IMPAD1Q9NX62 359 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 RDH8Q9NYR8 311 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 GPR132Q9UNW8 380 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 TNFRSF18Q9Y5U5 241 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 TRBV5-7A0A0A0MS05 114 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 A0A0A6YYD4 124 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 TCRBV3S1A0A5B6 114 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 K7EMT4 169 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 NDUFA4O00483 81 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 CREBL2O60519 120 aaPredicted RBP4.92□□□□□ -1.62
VCAN-206ENST00000505615 ATP6V1G1O75348 118 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 REG1AP05451 166 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 S100A6P06703 90 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 HOXB6P17509 224 aaKnown RBP4.92□□□□□ -1.62
VCAN-206ENST00000505615 HTR2CP28335 458 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 DUTP33316 252 aaKnown RBP4.92□□□□□ -1.62
VCAN-206ENST00000505615 DEFB131AP59861 70 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 RPS11P62280 158 aaKnown RBP eCLIP4.92□□□□□ -1.62
VCAN-206ENST00000505615 LIPKQ5VXJ0 399 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 TBC1D26Q86UD7 250 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 FAM24BQ8N5W8 94 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 TMEM170AQ8WVE7 144 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 FCGR1BQ92637 280 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 MRPL48Q96GC5 212 aaKnown RBP4.92□□□□□ -1.62
VCAN-206ENST00000505615 OR2A7Q96R45 310 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 NICN1Q9BSH3 213 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 RNF167Q9H6Y7 350 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 Q9N2K0 584 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 CLEC5AQ9NY25 188 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 SMPXQ9UHP9 88 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 TBC1D24Q9ULP9 559 aa4.92□□□□□ -1.62
VCAN-206ENST00000505615 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 LRP2P98164 4655 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 IGKV3-7A0A075B6H7 116 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 IGHV7-4-1A0A0J9YVY3 117 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 DPPA5A6NC42 116 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 OR2T8A6NH00 312 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 CD3GP09693 182 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 NPY1RP25929 384 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 CNN1P51911 297 aaKnown RBP4.91□□□□□ -1.62
VCAN-206ENST00000505615 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
VCAN-206ENST00000505615 LBHQ53QV2 105 aaPredicted RBP4.91□□□□□ -1.62
VCAN-206ENST00000505615 OR2G6Q5TZ20 316 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 OR10K2Q6IF99 312 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 STHQ8IWL8 128 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 VKORC1L1Q8N0U8 176 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 PUSL1Q8N0Z8 303 aaKnown RBP4.91□□□□□ -1.62
VCAN-206ENST00000505615 GBGT1Q8N5D6 347 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 LINC00469Q8N7U9 141 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 ADTRPQ96IZ2 230 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 C20orf24Q9BUV8 137 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 RHPN1-AS1Q9BWJ2 59 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 TM2D1Q9BX74 207 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 KRTAP1-5Q9BYS1 174 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 AK3Q9UIJ7 227 aa4.91□□□□□ -1.62
VCAN-206ENST00000505615 IGHV3-49A0A0A0MS15 119 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 IGLC7A0M8Q6 106 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 C15orf62A8K5M9 175 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
VCAN-206ENST00000505615 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 DFFBO76075 338 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 KBTBD11O94819 623 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 DHFRP00374 187 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 LIMS3P0CW19 117 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 LIMS4P0CW20 117 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 UNC119Q13432 240 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 TPBGQ13641 420 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 IL18Q14116 193 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 TMEM268Q5VZI3 342 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 RPL22L1Q6P5R6 122 aaKnown RBP4.9□□□□□ -1.63
VCAN-206ENST00000505615 ZNF66Q6ZN08 573 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 OR6M1Q8NGM8 313 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 TMEM167AQ8TBQ9 72 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 TRUB1Q8WWH5 349 aaKnown RBP4.9□□□□□ -1.63
VCAN-206ENST00000505615 SMIM19Q96E16 107 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 C17orf77Q96MU5 243 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 NEU1Q99519 415 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 CABLES2Q9BTV7 478 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 TMEM59Q9BXS4 323 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms