RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 FANCD2OSQ96PS1 177 aa19.32■□□□□ 0.68
PVT1-201ENST00000504719 KLK9Q9UKQ9 250 aa19.32■□□□□ 0.68
PVT1-201ENST00000504719 AKR1C4P17516 323 aa19.31■□□□□ 0.68
PVT1-201ENST00000504719 OR5B3Q8NH48 314 aa19.31■□□□□ 0.68
PVT1-201ENST00000504719 WWC2-AS2Q96NR7 200 aa19.31■□□□□ 0.68
PVT1-201ENST00000504719 SIGLEC8Q9NYZ4 499 aa19.31■□□□□ 0.68
PVT1-201ENST00000504719 FBXL7Q9UJT9 491 aa19.31■□□□□ 0.68
PVT1-201ENST00000504719 U3KQK5 164 aa19.31■□□□□ 0.68
PVT1-201ENST00000504719 CDS2O95674 445 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 P0C879 139 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 OR13C7P0DN81 318 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 DHODHQ02127 395 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 WT1-ASQ06250 92 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 FAM209BQ5JX69 171 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 DMRT1Q9Y5R6 373 aa19.3■□□□□ 0.68
PVT1-201ENST00000504719 LINC00854A0A1B0GVQ3 168 aa19.29■□□□□ 0.68
PVT1-201ENST00000504719 NDUFB8O95169 186 aa19.29■□□□□ 0.68
PVT1-201ENST00000504719 IL7P13232 177 aa19.29■□□□□ 0.68
PVT1-201ENST00000504719 HSD17B13Q7Z5P4 300 aaPredicted RBP19.29■□□□□ 0.68
PVT1-201ENST00000504719 RNASE11Q8TAA1 199 aaKnown RBP19.29■□□□□ 0.68
PVT1-201ENST00000504719 LHFPL5Q8TAF8 219 aa19.29■□□□□ 0.68
PVT1-201ENST00000504719 LSM10Q969L4 123 aaKnown RBP19.29■□□□□ 0.68
PVT1-201ENST00000504719 RRNAD1Q96FB5 475 aaKnown RBP19.29■□□□□ 0.68
PVT1-201ENST00000504719 KCNIP3Q9Y2W7 256 aa19.29■□□□□ 0.68
PVT1-201ENST00000504719 HIST1H1BP16401 226 aaKnown RBP19.28■□□□□ 0.68
PVT1-201ENST00000504719 TMED4Q7Z7H5 227 aa19.28■□□□□ 0.68
PVT1-201ENST00000504719 Q8N1Y9 231 aa19.28■□□□□ 0.68
PVT1-201ENST00000504719 RBPMSQ93062 196 aaKnown RBP19.28■□□□□ 0.68
PVT1-201ENST00000504719 TMEM56Q96MV1 263 aa19.28■□□□□ 0.68
PVT1-201ENST00000504719 SLC25A21Q9BQT8 299 aaPredicted RBP19.28■□□□□ 0.68
PVT1-201ENST00000504719 PEMTQ9UBM1 199 aa19.28■□□□□ 0.68
PVT1-201ENST00000504719 IGLV11-55A0A075B6I3 123 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 A0A0B4J293 547 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 A0A0G2JRQ6 117 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 PPP5D1E7EU14 171 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 FRMD6-AS1P0C7T7 363 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 MECP2P51608 486 aaKnown RBP19.27■□□□□ 0.68
PVT1-201ENST00000504719 TMEM268Q5VZI3 342 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 SBSPONQ8IVN8 264 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 SELENOHQ8IZQ5 122 aaKnown RBP19.27■□□□□ 0.68
PVT1-201ENST00000504719 GALNT14Q96FL9 552 aa19.27■□□□□ 0.68
PVT1-201ENST00000504719 NAP1L6A6NFF2 107 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 CCR6P51684 374 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 HSPE1P61604 102 aaKnown RBP19.26■□□□□ 0.67
PVT1-201ENST00000504719 SUPT4H1P63272 117 aaKnown RBP19.26■□□□□ 0.67
PVT1-201ENST00000504719 TMEM187Q14656 261 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 LINC00299Q6ZSB3 139 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 BATF3Q9NR55 127 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 PRR13Q9NZ81 148 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 TMEM56-RWDD3S4R434 201 aa19.26■□□□□ 0.67
PVT1-201ENST00000504719 HUWE1Q7Z6Z7 4374 aaKnown RBP19.25■□□□□ 0.67
PVT1-201ENST00000504719 GGCTO75223 188 aaKnown RBP19.25■□□□□ 0.67
PVT1-201ENST00000504719 IGHV3-23P01764 117 aa19.25■□□□□ 0.67
PVT1-201ENST00000504719 PRCDQ00LT1 54 aa19.25■□□□□ 0.67
PVT1-201ENST00000504719 CCDC140Q96MF4 163 aa19.25■□□□□ 0.67
PVT1-201ENST00000504719 S4R3C0 116 aa19.25■□□□□ 0.67
PVT1-201ENST00000504719 RBMS2Q15434 407 aaKnown RBP19.24■□□□□ 0.67
PVT1-201ENST00000504719 FAM219AQ8IW50 185 aa19.24■□□□□ 0.67
PVT1-201ENST00000504719 EEF1AKMT3Q96AZ1 226 aa19.24■□□□□ 0.67
PVT1-201ENST00000504719 PTTG2Q9NZH5 202 aa19.24■□□□□ 0.67
PVT1-201ENST00000504719 CENPXA8MT69 81 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 CYB5BO43169 146 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 ST8SIA3O43173 380 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 OR2C1O95371 312 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 HLA-AP01891 365 aaKnown RBP19.23■□□□□ 0.67
PVT1-201ENST00000504719 ANXA3P12429 323 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 TMEM128Q5BJH2 165 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 SPINK9Q5DT21 86 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 LCN12Q6JVE5 192 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 CLEC19AQ6UXS0 136 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 ADAMTSL5Q6ZMM2 481 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 Q6ZRM9 215 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 IL22RA2Q969J5 263 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 THYN1Q9P016 225 aa19.23■□□□□ 0.67
PVT1-201ENST00000504719 F11RQ9Y624 299 aaKnown RBP19.23■□□□□ 0.67
PVT1-201ENST00000504719 IZUMO1RA6ND01 250 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 A8MZ25 164 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 IFNA17P01571 189 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 IGHV4-30-4P0DP06 118 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 ARL3P36405 182 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 SLC25A24Q6NUK1 477 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 SLC35G3Q8N808 338 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 OR2K2Q8NGT1 345 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 GPR146Q96CH1 333 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 C7orf50Q9BRJ6 194 aaKnown RBP19.22■□□□□ 0.67
PVT1-201ENST00000504719 PDCD10Q9BUL8 212 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 PLEKHA3Q9HB20 300 aa19.22■□□□□ 0.67
PVT1-201ENST00000504719 MFSD2BA6NFX1 497 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 LGALS9O00182 355 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 MFAP2P55001 183 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 GPHB5Q86YW7 130 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 CENPSQ8N2Z9 138 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 S100ZQ8WXG8 99 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 CXorf58Q96LI9 332 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 C19orf73Q9NVV2 129 aa19.21■□□□□ 0.67
PVT1-201ENST00000504719 TRBV7-1A0A0A6YYK4 115 aa19.2■□□□□ 0.66
PVT1-201ENST00000504719 NDUFB6O95139 128 aa19.2■□□□□ 0.66
PVT1-201ENST00000504719 VAMP1P23763 118 aa19.2■□□□□ 0.66
PVT1-201ENST00000504719 BTCP35070 178 aa19.2■□□□□ 0.66
PVT1-201ENST00000504719 OR2C3Q8N628 320 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms