RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 WT1-ASQ06250 92 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 SMCO1Q147U7 214 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 PDLIM3Q53GG5 364 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 PLET1Q6UQ28 207 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 MRPL41Q8IXM3 137 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 KLHL30-AS1Q8NEE0 82 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 OR4F17Q8NGA8 305 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 OR52E5Q8NH55 327 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 USMG5Q96IX5 58 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 OR4F4Q96R69 305 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 MARVELD1Q9BSK0 173 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 PDCD10Q9BUL8 212 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 HINT2Q9BX68 163 aa9.25□□□□□ -0.93
PDLIM5-208ENST00000504489 A0A0G2JLM5 398 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 IFNA17P01571 189 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 REG1AP05451 166 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 HIST1H1BP16401 226 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 SPCS3P61009 180 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 RUNX1Q01196 453 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 PRR31Q5SQ13 230 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 OR52B4Q8NGK2 314 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 ZNF431Q8TF32 576 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 C4orf3Q8WVX3 66 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 FANCD2OSQ96PS1 177 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 GNB4Q9HAV0 340 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 PLEKHA3Q9HB20 300 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 PKD1L1Q8TDX9 2849 aa9.24□□□□□ -0.93
PDLIM5-208ENST00000504489 IGLV11-55A0A075B6I3 123 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 NUDT19A8MXV4 375 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 I3L521 148 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 CYB5BO43169 146 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 PITX3O75364 302 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 TSPAN15O95858 294 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 PRH1P02810 166 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 HOXB5P09067 269 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 DEFA4P12838 97 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 ERHP84090 104 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 RHOGP84095 191 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 GGNBP1Q5YKI7 109 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 OR2C3Q8N628 320 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 NECAP1Q8NC96 275 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
PDLIM5-208ENST00000504489 C13orf42A0A1B0GVH6 325 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 INMT-MINDY4F8WBC2 141 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 PRAF2O60831 178 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 ADAP1O75689 374 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 PTTG1O95997 202 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 IFNA21P01568 189 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 LGALS1P09382 135 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 TNFRSF9Q07011 255 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 C19orf35Q6ZS72 473 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 ZNF114Q8NC26 417 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 OR1L6Q8NGR2 347 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 OR1S1Q8NH92 325 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 GPN1Q9HCN4 374 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 HSPB7Q9UBY9 170 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 DMRT1Q9Y5R6 373 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 F11RQ9Y624 299 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 NOTCH3Q9UM47 2321 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 TRRAPQ9Y4A5 3859 aa9.22□□□□□ -0.93
PDLIM5-208ENST00000504489 FAM90A26D6RGX4 464 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 CCL24O00175 119 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 OR2J3O76001 311 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 SPNP16150 400 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 MYCNOSP40205 109 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 HOXA1P49639 335 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 ATP5G2Q06055 141 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 SPINK9Q5DT21 86 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 ZNF343Q6P1L6 599 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 ETV3LQ6ZN32 361 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 C12orf45Q8N5I9 185 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 OR1P1Q8NH06 330 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 RAX2Q96IS3 184 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 P2RX4Q99571 388 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 ENY2Q9NPA8 101 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 THYN1Q9P016 225 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 FBXL7Q9UJT9 491 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 DNHD1Q96M86 4753 aa9.21□□□□□ -0.94
PDLIM5-208ENST00000504489 CEBPZOSA8MTT3 80 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 SNRPGP15A8MWD9 76 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 NDUFB8O95169 186 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 IGHV3-11P01762 117 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 PF4P02776 101 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 SNCAP37840 140 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 MFAP2P55001 183 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 DEFA5Q01523 94 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 C15orf32Q32M92 178 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 BSXQ3C1V8 233 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 FAM209BQ5JX69 171 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 SLC25A24Q6NUK1 477 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 OR5B12Q96R08 314 aa9.2□□□□□ -0.94
PDLIM5-208ENST00000504489 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 MED6O75586 246 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms