RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SPSB3Q6PJ21 355 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 DPPA3Q6W0C5 159 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 DDB2Q92466 427 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 CIB3Q96Q77 187 aaPredicted RBP9.5□□□□□ -0.89
USP46-204ENST00000503060 S1PR3Q99500 378 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 UBTD1Q9HAC8 227 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 DYNLRB1Q9NP97 96 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 TMEM106BQ9NUM4 274 aa9.5□□□□□ -0.89
USP46-204ENST00000503060 SAA2-SAA4A0A096LPE2 208 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.49□□□□□ -0.89
USP46-204ENST00000503060 CCL21O00585 134 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 MMP23AO75900 390 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 SAA2P0DJI9 122 aaPredicted RBP9.49□□□□□ -0.89
USP46-204ENST00000503060 PPT1P50897 306 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 KHDC1LQ5JSQ8 128 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 PSMG3Q9BT73 122 aaPredicted RBP9.49□□□□□ -0.89
USP46-204ENST00000503060 PBDC1Q9BVG4 233 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
USP46-204ENST00000503060 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
USP46-204ENST00000503060 LINC00312Q9Y6C7 94 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 IGF2RP11717 2491 aa9.49□□□□□ -0.89
USP46-204ENST00000503060 A0A1B0GW64 132 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 CEBPZOSA8MTT3 80 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 CHRNB4P30926 498 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 CCL17Q92583 94 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
USP46-204ENST00000503060 C20orf202A1L168 122 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 PMS2P5A8MQ11 134 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 NPBWR1P48145 328 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 THBS3P49746 956 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 OR2B8PP59922 312 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 ERVK-16P61578 105 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
USP46-204ENST00000503060 CCL20P78556 96 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 MEF2CQ06413 473 aaPredicted RBP9.48□□□□□ -0.89
USP46-204ENST00000503060 SPINK9Q5DT21 86 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 SP5Q6BEB4 398 aaPredicted RBP9.48□□□□□ -0.89
USP46-204ENST00000503060 UNQ6494/PRO21346Q6UXR6 183 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 LYG1Q8N1E2 194 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 OR4S2Q8NH73 311 aa9.48□□□□□ -0.89
USP46-204ENST00000503060 WDR61Q9GZS3 305 aaKnown RBP9.48□□□□□ -0.89
USP46-204ENST00000503060 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
USP46-204ENST00000503060 TNFRSF13BO14836 293 aaPredicted RBP9.47□□□□□ -0.89
USP46-204ENST00000503060 OR4A16Q8NH70 328 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 ADTRPQ96IZ2 230 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 DNAJC4Q9NNZ3 241 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 UBE2L5PA0A1B0GUS4 154 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 SEC14L6B5MCN3 397 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 FCN3O75636 299 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 PLAUP00749 431 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 FOLR2P14207 255 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 RPL31P62899 125 aaKnown RBP9.47□□□□□ -0.89
USP46-204ENST00000503060 RELBQ01201 579 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 KCNIP4Q6PIL6 250 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 SLC25A48Q6ZT89 311 aaKnown RBP9.47□□□□□ -0.89
USP46-204ENST00000503060 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 TAF15Q92804 592 aaKnown RBP eCLIP9.47□□□□□ -0.89
USP46-204ENST00000503060 TMEM147Q9BVK8 224 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 POLEQ07864 2286 aa9.47□□□□□ -0.89
USP46-204ENST00000503060 HBE1P02100 147 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.89
USP46-204ENST00000503060 LGALS7P47929 136 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 SERF2P84101 59 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 CCDC144NLQ6NUI1 221 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 LYPD2Q6UXB3 125 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.89
USP46-204ENST00000503060 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.89
USP46-204ENST00000503060 RPRMQ9NS64 109 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 KIAA1456Q9P272 454 aa9.46□□□□□ -0.89
USP46-204ENST00000503060 ROS1P08922 2347 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 A8MWP6 167 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 NDUFB3O43676 98 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 CAMPP49913 170 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 ADORA2A-AS1P86434 159 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 OR10P1Q8NGE3 313 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 OR52E5Q8NH55 327 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
USP46-204ENST00000503060 RARRES2Q99969 163 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 SMDT1Q9H4I9 107 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 VSIRQ9H7M9 311 aa9.46□□□□□ -0.9
USP46-204ENST00000503060 CISD1Q9NZ45 108 aaKnown RBP9.46□□□□□ -0.9
USP46-204ENST00000503060 TRAV3A0A0B4J244 114 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 C1orf196B1AJZ1 125 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 MT-CO2P00403 227 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 CCL3L1P16619 93 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 LRRC10Q5BKY1 277 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 TMEM200BQ69YZ2 307 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 SIGLEC15Q6ZMC9 328 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 SLC35B3Q9H1N7 401 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 TIMM9Q9Y5J7 89 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 C15orf62A8K5M9 175 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 ERVFRD-1P60508 538 aa9.45□□□□□ -0.9
USP46-204ENST00000503060 RPS20P60866 119 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms